WARNING: [license.mk] Every package should define a LICENSE. => Checksum BLAKE2s OK for netcdf-cxx4-4.3.1.tar.gz => Checksum SHA512 OK for netcdf-cxx4-4.3.1.tar.gz ===> Installing dependencies for netcdf-cxx-4.3.1nb10 ========================================================================== The following variables will affect the build process of this package, netcdf-cxx-4.3.1nb10. Their current value is shown below: * SSLBASE (defined) * SSLCERTBUNDLE (not defined) * SSLCERTS = /opt/pkg/etc/openssl/certs * SSLDIR = /opt/pkg/etc/openssl * SSLKEYS = /opt/pkg/etc/openssl/private You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/opt/pkg/bin/bmake clean' after the changes. ========================================================================== => Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.7nb1 => Tool dependency nbpatch-[0-9]*: found nbpatch-20151107 => Tool dependency cwrappers>=20150314: found cwrappers-20220403 => Tool dependency checkperms>=1.1: found checkperms-1.12 => Full dependency pkg_install-info-[0-9]*: found pkg_install-info-4.5nb3 => Full dependency netcdf>=4.9.2nb10: found netcdf-4.9.3 => Full dependency bzip2>=1.0.1: found bzip2-1.0.8 => Full dependency curl>=7.12.3: found curl-8.16.0nb2 => Full dependency cyrus-sasl>=2.1.12: found cyrus-sasl-2.1.28nb2 => Full dependency gettext-lib>=0.22: found gettext-lib-0.22.5 => Full dependency hdf5>=1.8.7: found hdf5-1.14.6 => Full dependency libiconv>=1.9.1: found libiconv-1.17nb1 => Full dependency libaec>=1.0.4: found libaec-1.1.3 => Full dependency libexecinfo>=1.1: found libexecinfo-1.1nb1 => Full dependency libidn2>=2.0.0: found libidn2-2.3.7 => Full dependency libssh2>=0.18: found libssh2-1.11.1 => Full dependency libunistring>=0.9.3: found libunistring-1.2 => Full dependency libxml2>=2.6.2: found libxml2-2.14.6 => Full dependency nghttp2>=1.0.0: found nghttp2-1.68.0 => Full dependency openldap-client>=2.4.6: found openldap-client-2.6.10 => Full dependency openssl>=1.1.1: found openssl-3.6.0 => Full dependency xz>=5.0.0: found xz-5.8.1 => Full dependency zlib>=1.1.4: found zlib-1.3.1 ===> Overriding tools for netcdf-cxx-4.3.1nb10 ===> Extracting for netcdf-cxx-4.3.1nb10 ===> Patching for netcdf-cxx-4.3.1nb10 => Applying pkgsrc patches for netcdf-cxx-4.3.1nb10 => Verifying /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/devel/netcdf-cxx/patches/patch-Makefile.in => Applying pkgsrc patch /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/devel/netcdf-cxx/patches/patch-Makefile.in Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-Makefile.in,v 1.1 2023/10/06 13:40:47 adam Exp $ | |Link against libnetcdf. | |--- cxx4/Makefile.in.orig 2023-10-06 13:23:06.487803070 +0000 |+++ cxx4/Makefile.in -------------------------- Patching file cxx4/Makefile.in using Plan A... Hunk #1 succeeded at 137. done => Verifying /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/devel/netcdf-cxx/patches/patch-plugins_H5Zbzip2.c => Applying pkgsrc patch /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/devel/netcdf-cxx/patches/patch-plugins_H5Zbzip2.c Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-plugins_H5Zbzip2.c,v 1.1 2023/10/06 13:40:47 adam Exp $ | |Avoid missing symbols. | |--- plugins/H5Zbzip2.c.orig 2023-10-06 13:31:12.412087559 +0000 |+++ plugins/H5Zbzip2.c -------------------------- Patching file plugins/H5Zbzip2.c using Plan A... Hunk #1 succeeded at 201. Hunk #2 succeeded at 213. done => Verifying /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/devel/netcdf-cxx/patches/patch-plugins_H5Ztemplate.c => Applying pkgsrc patch /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/devel/netcdf-cxx/patches/patch-plugins_H5Ztemplate.c Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-plugins_H5Ztemplate.c,v 1.1 2023/10/06 13:40:47 adam Exp $ | |Avoid missing symbols. | |--- plugins/H5Ztemplate.c.orig 2023-10-06 13:30:10.395421663 +0000 |+++ plugins/H5Ztemplate.c -------------------------- Patching file plugins/H5Ztemplate.c using Plan A... Hunk #1 succeeded at 92. done ===> Creating toolchain wrappers for netcdf-cxx-4.3.1nb10 ===> Configuring for netcdf-cxx-4.3.1nb10 => Modifying GNU configure scripts to avoid --recheck => Replacing config-guess with pkgsrc versions => Replacing config-sub with pkgsrc versions => Replacing install-sh with pkgsrc version configure: WARNING: unrecognized options: --with-libiconv-prefix configure: netCDF-cxx4 4.3.1 checking build system type... aarch64-apple-darwin23 checking host system type... aarch64-apple-darwin23 checking target system type... aarch64-apple-darwin23 checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g staff checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... /opt/pkg/bin/nawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether netCDF extra tests should be run (developers only)... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking where to put large temp files if large file tests are run... . checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding other utilities configure: setting up libtool checking how to print strings... print -r checking whether make supports the include directive... yes (GNU style) checking for aarch64-apple-darwin23-gcc... clang checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang accepts -g... yes checking for clang option to accept ISO C89... none needed checking whether clang understands -c and -o together... yes checking dependency style of clang... gcc3 checking for a sed that does not truncate output... /opt/pkg/bin/nbsed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking for fgrep... /usr/bin/grep -F checking for ld used by clang... /Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 1048576 checking how to convert aarch64-apple-darwin23 file names to aarch64-apple-darwin23 format... func_convert_file_noop checking how to convert aarch64-apple-darwin23 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for aarch64-apple-darwin23-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for aarch64-apple-darwin23-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... print -r -- checking for aarch64-apple-darwin23-ar... no checking for ar... ar checking for archiver @FILE support... no checking for aarch64-apple-darwin23-strip... no checking for strip... strip checking for aarch64-apple-darwin23-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from clang object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for aarch64-apple-darwin23-mt... no checking for mt... no checking if : is a manifest tool... no checking for aarch64-apple-darwin23-dsymutil... no checking for dsymutil... dsymutil checking for aarch64-apple-darwin23-nmedit... no checking for nmedit... nmedit checking for aarch64-apple-darwin23-lipo... no checking for lipo... lipo checking for aarch64-apple-darwin23-otool... no checking for otool... otool checking for aarch64-apple-darwin23-otool64... no checking for otool64... no checking for -single_module linker flag... ld: warning: -single_module is obsolete no checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... clang -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if clang supports -fno-rtti -fno-exceptions... yes checking for clang option to produce PIC... -fno-common -DPIC checking if clang PIC flag -fno-common -DPIC works... yes checking if clang static flag -static works... no checking if clang supports -c -o file.o... rm: conftest*: No such file or directory yes checking if clang supports -c -o file.o... (cached) yes checking whether the clang linker (/Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin23 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether clang++ accepts -g... yes checking dependency style of clang++... gcc3 checking how to run the C++ preprocessor... clang++ -E checking for ld used by clang++... /Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the clang++ linker (/Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for clang++ option to produce PIC... -fno-common -DPIC checking if clang++ PIC flag -fno-common -DPIC works... yes checking if clang++ static flag -static works... no checking if clang++ supports -c -o file.o... rm: conftest*: No such file or directory yes checking if clang++ supports -c -o file.o... (cached) yes checking whether the clang++ linker (/Applications/Xcode-15.4.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin23 dyld checking how to hardcode library paths into programs... immediate checking for gawk... (cached) /opt/pkg/bin/nawk checking for aarch64-apple-darwin23-gcc... (cached) clang checking whether we are using the GNU C compiler... (cached) yes checking whether clang accepts -g... (cached) yes checking for clang option to accept ISO C89... (cached) none needed checking whether clang understands -c and -o together... (cached) yes checking dependency style of clang... (cached) gcc3 checking how to run the C preprocessor... clang -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for ptrdiff_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for nc-config... /opt/pkg/bin/nc-config configure: checking output of nc-config checking for nc_def_var_filter in -lnetcdf... yes checking whether filter testing should be run... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes checking netCDF has logging... no checking netCDF has dap... yes checking netCDF has pnetcdf... no checking netCDF has filter support... yes configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating test_common.sh config.status: creating Makefile config.status: creating cxx4/Makefile config.status: creating examples/Makefile config.status: creating docs/Makefile config.status: creating ncxx4-config config.status: creating netcdf-cxx4.pc config.status: creating cxx4/findplugin.sh config.status: creating plugins/Makefile config.status: creating examples/tst_filter.sh config.status: creating examples/findplugin.sh config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands rm: libtoolT: No such file or directory configure: WARNING: unrecognized options: --with-libiconv-prefix => Modifying libtool scripts to use pkgsrc libtool => Modifying libtool scripts to use pkgsrc depcomp