+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /opt/local/bin/bmake stage-install BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-PROJ-0.5.0nb8/work.log
+ su pbulk -c '"$@"' make /opt/local/bin/bmake stage-install BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-PROJ-0.5.0nb8/work.log
===> Installing for R-PROJ-0.5.0nb8
=> Generating pre-install file lists
=> Creating installation directories
* installing *source* package 'PROJ' ...
** this is package 'PROJ' version '0.5.0'
** package 'PROJ' successfully unpacked and MD5 sums checked
** using staged installation
checking whether pkg-config knows about proj... no
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking for grep that handles long lines and -e... /home/pbulk/build/geography/R-PROJ/work/.tools/bin/grep
checking for egrep... /home/pbulk/build/geography/R-PROJ/work/.tools/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking proj.h usability... yes
checking proj.h presence... yes
checking for proj.h... yes
checking for proj_get_source_crs in -lproj... yes
checking for proj_as_wkt in -lproj... yes
configure: PROJ6 API available: yes
configure: setting CCPFLAGS: -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 
configure: setting PROJ_LIBS: 
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: 'gcc (GCC) 13.4.0'
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c C_proj_crs_text.c -o C_proj_crs_text.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c C_proj_version.c -o C_proj_version.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c init.c -o init.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c proj-utils.c -o proj-utils.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c r-utils.c -o r-utils.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c wk-impl.c -o wk-impl.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c wk-trans.c -o wk-trans.o
gcc -std=gnu2x -I"/opt/local/lib/R/include" -DNDEBUG -I/opt/local/include -DLDAP_DEPRECATED -I/usr/include -I/opt/local/include/libxml2 -I'/opt/local/lib/R/library/wk/include' -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2    -fPIC  -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -pthread -I/opt/local/include -I/opt/local/include/glib-2.0 -I/opt/local/include/gio-unix-2.0 -I/opt/local/lib/glib-2.0/include -I/usr/include -I/opt/local/include/freetype2 -I/opt/local/include/harfbuzz -I/opt/local/include/ncurses -DLDAP_DEPRECATED -I/opt/local/include/libxml2  -c xptr.c -o xptr.o
gcc -std=gnu2x -shared -L/opt/local/lib/R/lib -Wl,-R/opt/local/lib/R/lib -L/opt/local/lib -Wl,-R/opt/local/lib -liconv -lintl -pthread -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o PROJ.so C_proj_crs_text.o C_proj_version.o init.o proj-utils.o r-utils.o wk-impl.o wk-trans.o xptr.o -lproj -lproj -L/opt/local/lib/R/lib
installing to /home/pbulk/build/geography/R-PROJ/work/.destdir/opt/local/lib/R/library/00LOCK-PROJ/00new/PROJ/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
elfedit: invalid option -- r
Usage: elfedit <option(s)> elffile(s)
 Update the ELF header of ELF files
 The options are:
  --input-mach [none|i386|iamcu|l1om|k1om|x86_64]
                              Set input machine type
  --output-mach [none|i386|iamcu|l1om|k1om|x86_64]
                              Set output machine type
  --input-type [none|rel|exec|dyn]
                              Set input file type
  --output-type [none|rel|exec|dyn]
                              Set output file type
  --input-osabi [none|HPUX|NetBSD|GNU|Linux|Solaris|AIX|Irix|FreeBSD|TRU64|Modesto|OpenBSD|OpenVMS|NSK|AROS|FenixOS]
                              Set input OSABI
  --output-osabi [none|HPUX|NetBSD|GNU|Linux|Solaris|AIX|Irix|FreeBSD|TRU64|Modesto|OpenBSD|OpenVMS|NSK|AROS|FenixOS]
                              Set output OSABI
  --input-abiversion [0-255]  Set input ABIVERSION
  --output-abiversion [0-255] Set output ABIVERSION
  --enable-x86-feature [ibt|shstk|lam_u48|lam_u57]
                              Enable x86 feature
  --disable-x86-feature [ibt|shstk|lam_u48|lam_u57]
                              Disable x86 feature
  -h --help                   Display this information
  -v --version                Display the version number of elfedit
elfedit: invalid option -- r
Usage: elfedit <option(s)> elffile(s)
 Update the ELF header of ELF files
 The options are:
  --input-mach [none|i386|iamcu|l1om|k1om|x86_64]
                              Set input machine type
  --output-mach [none|i386|iamcu|l1om|k1om|x86_64]
                              Set output machine type
  --input-type [none|rel|exec|dyn]
                              Set input file type
  --output-type [none|rel|exec|dyn]
                              Set output file type
  --input-osabi [none|HPUX|NetBSD|GNU|Linux|Solaris|AIX|Irix|FreeBSD|TRU64|Modesto|OpenBSD|OpenVMS|NSK|AROS|FenixOS]
                              Set input OSABI
  --output-osabi [none|HPUX|NetBSD|GNU|Linux|Solaris|AIX|Irix|FreeBSD|TRU64|Modesto|OpenBSD|OpenVMS|NSK|AROS|FenixOS]
                              Set output OSABI
  --input-abiversion [0-255]  Set input ABIVERSION
  --output-abiversion [0-255] Set output ABIVERSION
  --enable-x86-feature [ibt|shstk|lam_u48|lam_u57]
                              Enable x86 feature
  --disable-x86-feature [ibt|shstk|lam_u48|lam_u57]
                              Disable x86 feature
  -h --help                   Display this information
  -v --version                Display the version number of elfedit
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PROJ)
=> Generating CTF data
=> Automatic stripping of debug information
=> Automatic manual page handling
=> Generating post-install file lists
=> Checking file-check results for R-PROJ-0.5.0nb8
=> Checking for non-existent script interpreters in R-PROJ-0.5.0nb8
=> Checking file permissions in R-PROJ-0.5.0nb8
=> Checking for missing run-time search paths in R-PROJ-0.5.0nb8
=> Checking for work-directory references in R-PROJ-0.5.0nb8