[*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include CMakeCCompilerId.c <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include CMakeCCompilerId.c -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf [*] cc -print-sysroot <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -I/tmp/work/biology/kallisto/work/.buildlink/include [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include CMakeCXXCompilerId.cpp <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include CMakeCXXCompilerId.cpp -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -E -x c++-header /opt/local/share/cmake-4.4/Modules/CXX-DetectStdlib.h -o - <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -E -x c++-header /opt/local/share/cmake-4.4/Modules/CXX-DetectStdlib.h -o - -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc [*] c++ -print-sysroot <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include [*] cc -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -v -o CMakeFiles/cmTC_0212b.dir/CMakeCCompilerABI.c.o -c /opt/local/share/cmake-4.4/Modules/CMakeCCompilerABI.c <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_0212b.dir/CMakeCCompilerABI.c.o -c /opt/local/share/cmake-4.4/Modules/CMakeCCompilerABI.c -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf [*] cc -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -v CMakeFiles/cmTC_0212b.dir/CMakeCCompilerABI.c.o -o cmTC_0212b <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib -v CMakeFiles/cmTC_0212b.dir/CMakeCCompilerABI.c.o -o cmTC_0212b -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -lumem [*] c++ -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -v -o CMakeFiles/cmTC_f87f4.dir/CMakeCXXCompilerABI.cpp.o -c /opt/local/share/cmake-4.4/Modules/CMakeCXXCompilerABI.cpp <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_f87f4.dir/CMakeCXXCompilerABI.cpp.o -c /opt/local/share/cmake-4.4/Modules/CMakeCXXCompilerABI.cpp -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc [*] c++ -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -v CMakeFiles/cmTC_f87f4.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_f87f4 <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib -v CMakeFiles/cmTC_f87f4.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_f87f4 -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -lumem [*] c++ -DCOMPILER_SUPPORTS_CXX17 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -std=c++17 -o CMakeFiles/cmTC_90a66.dir/src.cxx.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-vOa1Yb/src.cxx <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DCOMPILER_SUPPORTS_CXX17 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -std=c++17 -o CMakeFiles/cmTC_90a66.dir/src.cxx.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-vOa1Yb/src.cxx -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 CMakeFiles/cmTC_90a66.dir/src.cxx.o -o cmTC_90a66 <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib CMakeFiles/cmTC_90a66.dir/src.cxx.o -o cmTC_90a66 -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -lumem [*] cc -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -o CMakeFiles/cmTC_085f7.dir/src.c.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-wOa1Yb/src.c <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_085f7.dir/src.c.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-wOa1Yb/src.c -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 CMakeFiles/cmTC_085f7.dir/src.c.o -o cmTC_085f7 <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib CMakeFiles/cmTC_085f7.dir/src.c.o -o cmTC_085f7 -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -lumem [*] /tmp/work/biology/kallisto/work/.tools/bin/mkdir -p build <.> /usr/bin/mkdir -p -p build [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include CMakeCCompilerId.c <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include CMakeCCompilerId.c -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf [*] cc -print-sysroot <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -I/tmp/work/biology/kallisto/work/.buildlink/include [*] c++ -Wno-subobject-linkage -Wno-return-type CMakeCXXCompilerId.cpp <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type CMakeCXXCompilerId.cpp -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include [*] c++ -Wno-subobject-linkage -Wno-return-type -E -x c++-header /opt/local/share/cmake-4.4/Modules/CXX-DetectStdlib.h -o - <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type -E -x c++-header /opt/local/share/cmake-4.4/Modules/CXX-DetectStdlib.h -o - -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include [*] c++ -print-sysroot <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include [*] cc -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -v -o CMakeFiles/cmTC_4e9a3.dir/CMakeCCompilerABI.c.o -c /opt/local/share/cmake-4.4/Modules/CMakeCCompilerABI.c <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_4e9a3.dir/CMakeCCompilerABI.c.o -c /opt/local/share/cmake-4.4/Modules/CMakeCCompilerABI.c -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf [*] cc -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -v CMakeFiles/cmTC_4e9a3.dir/CMakeCCompilerABI.c.o -o cmTC_4e9a3 <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib -v CMakeFiles/cmTC_4e9a3.dir/CMakeCCompilerABI.c.o -o cmTC_4e9a3 -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -lumem [*] c++ -Wno-subobject-linkage -Wno-return-type -v -o CMakeFiles/cmTC_4bd2e.dir/CMakeCXXCompilerABI.cpp.o -c /opt/local/share/cmake-4.4/Modules/CMakeCXXCompilerABI.cpp <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type -v -o CMakeFiles/cmTC_4bd2e.dir/CMakeCXXCompilerABI.cpp.o -c /opt/local/share/cmake-4.4/Modules/CMakeCXXCompilerABI.cpp -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include [*] c++ -Wno-subobject-linkage -Wno-return-type -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -v CMakeFiles/cmTC_4bd2e.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_4bd2e <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib -v CMakeFiles/cmTC_4bd2e.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_4bd2e -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include -lumem [*] cc -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -o CMakeFiles/cmTC_7019e.dir/src.c.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/build/CMakeFiles/CMakeScratch/TryCompile-mKar_b/src.c <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_7019e.dir/src.c.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/build/CMakeFiles/CMakeScratch/TryCompile-mKar_b/src.c -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 CMakeFiles/cmTC_7019e.dir/src.c.o -o cmTC_7019e <.> /tmp/work/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/kallisto/work/.buildlink/include -L/tmp/work/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/local/lib CMakeFiles/cmTC_7019e.dir/src.c.o -o cmTC_7019e -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -lumem [*] c++ -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/tmp/work/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src -Wno-subobject-linkage -Wno-return-type -std=c++11 -O3 -DNDEBUG -O3 -MD -MT src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -MF CMakeFiles/bifrost_static.dir/Bifrost.cpp.o.d -o CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src/Bifrost.cpp <.> /tmp/work/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/tmp/work/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src -Wno-subobject-linkage -Wno-return-type -std=c++11 -O3 -DNDEBUG -O3 -MD -MT src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -MF CMakeFiles/bifrost_static.dir/Bifrost.cpp.o.d -o CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -c /tmp/work/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src/Bifrost.cpp -specs=/tmp/work/biology/kallisto/work/.cwrapper/specs.pkgsrc -I/tmp/work/biology/kallisto/work/.buildlink/include