=> "/opt/local/bin/bmake" ["-C", "/data/jenkins/workspace/pkgsrc-trunk-x86_64/math/R-emdbook", "stage-install", "BATCH=1", "DEPENDS_TARGET=/nonexistent"] ===> Installing for R-emdbook-1.3.13 => Generating pre-install file lists => Creating installation directories * installing *source* package 'emdbook' ... ** this is package 'emdbook' version '1.3.13' ** package 'emdbook' successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emdbook) => Generating CTF data => Automatic stripping of debug information => Automatic manual page handling => Generating post-install file lists => Checking file-check results for R-emdbook-1.3.13 => Checking for non-existent script interpreters in R-emdbook-1.3.13 => Checking file permissions in R-emdbook-1.3.13 warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/Owls.RData: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/Owls.dat: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/firfec0.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/firfec1.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/firfec2.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/frogpred.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/gammanorm.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/myxo1.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/myxogamma.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/negbinom.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/reefgobysurv.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/statespace.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/testmyxo.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/BUGS/trees.bug: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/CITATION: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/NEWS.Rd: executable bit is set on non-executable file. warning: /tmp/work/math/R-emdbook/work/.destdir/opt/local/lib/R/library/emdbook/misc/firfec-batch.R: executable bit is set on non-executable file. 0 errors and 17 warnings. => Checking for missing run-time search paths in R-emdbook-1.3.13 => Checking for work-directory references in R-emdbook-1.3.13