=> "/opt/local/bin/bmake" ["-C", "/data/jenkins/workspace/pkgsrc-trunk-x86_64/biology/bioperl", "configure", "BATCH=1", "DEPENDS_TARGET=/nonexistent"]
=> Checksum BLAKE2s OK for BioPerl-1.7.7.tar.gz
=> Checksum SHA512 OK for BioPerl-1.7.7.tar.gz
===> Installing dependencies for bioperl-1.7.7nb7
==========================================================================
The supported build options for bioperl are:

	mysql pgsql sqlite

You can select which build options to use by setting PKG_DEFAULT_OPTIONS
or the following variable.  Its current value is shown:

	PKG_OPTIONS.bioperl (not defined)

==========================================================================
=> Tool dependency p5-Test-Most-[0-9]*: found p5-Test-Most-0.38nb4
=> Tool dependency p5-Text-Diff-[0-9]*: found p5-Text-Diff-1.45nb9
=> Tool dependency p5-Module-Install>=0.91: found p5-Module-Install-1.21nb3
=> Tool dependency pax>=20040802: found pax-20210219
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Build dependency gcc13>=13.4.0: found gcc13-13.4.0
=> Full dependency p5-Algorithm-Munkres-[0-9]*: found p5-Algorithm-Munkres-0.08nb13
=> Full dependency p5-Array-Compare-[0-9]*: found p5-Array-Compare-3.0.8nb5
=> Full dependency p5-Bio-ASN1-EntrezGene-[0-9]*: found p5-Bio-ASN1-EntrezGene-1.73nb6
=> Full dependency p5-Clone-[0-9]*: found p5-Clone-0.50nb1
=> Full dependency p5-Convert-Binary-C-[0-9]*: found p5-Convert-Binary-C-0.85nb2
=> Full dependency p5-Data-Stag>=0.11: found p5-Data-Stag-0.14nb13
=> Full dependency p5-Error-[0-9]*: found p5-Error-0.17030nb2
=> Full dependency p5-GD-[0-9]*: found p5-GD-2.86nb2
=> Full dependency p5-Graph>=0.50: found p5-Graph-0.9735nb1
=> Full dependency p5-GraphViz-[0-9]*: found p5-GraphViz-2.24nb9
=> Full dependency p5-HTML-Parser>=3: found p5-HTML-Parser-3.85nb1
=> Full dependency p5-HTML-TableExtract-[0-9]*: found p5-HTML-TableExtract-2.15nb10
=> Full dependency p5-IO-String-[0-9]*: found p5-IO-String-1.08nb18
=> Full dependency p5-List-MoreUtils-[0-9]*: found p5-List-MoreUtils-0.430nb6
=> Full dependency p5-PostScript-[0-9]*: found p5-PostScript-0.06nb14
=> Full dependency p5-SOAP-Lite-[0-9]*: found p5-SOAP-Lite-1.27nb9
=> Full dependency p5-SVG-Graph>=0.01: found p5-SVG-Graph-0.04nb13
=> Full dependency p5-SVG>=2.26: found p5-SVG-2.85nb6
=> Full dependency p5-Set-Scalar-[0-9]*: found p5-Set-Scalar-1.29nb12
=> Full dependency p5-Sort-Naturally-[0-9]*: found p5-Sort-Naturally-1.03nb14
=> Full dependency p5-Spreadsheet-ParseExcel-[0-9]*: found p5-Spreadsheet-ParseExcel-0.6600nb3
=> Full dependency p5-XML-Parser-[0-9]*: found p5-XML-Parser-2.59nb1
=> Full dependency p5-XML-SAX-Writer-[0-9]*: found p5-XML-SAX-Writer-0.57nb9
=> Full dependency p5-XML-SAX>=0.15: found p5-XML-SAX-1.02nb6
=> Full dependency p5-XML-Simple-[0-9]*: found p5-XML-Simple-2.25nb9
=> Full dependency p5-XML-Twig-[0-9]*: found p5-XML-Twig-3.52nb11
=> Full dependency p5-XML-Writer>=0.4: found p5-XML-Writer-0.900nb6
=> Full dependency p5-YAML-[0-9]*: found p5-YAML-1.30nb6
=> Full dependency p5-libwww-[0-9]*: found p5-libwww-6.83nb1
=> Full dependency p5-libxml-[0-9]*: found p5-libxml-0.08nb22
=> Full dependency p5-XML-DOM>=0: found p5-XML-DOM-1.46nb10
=> Full dependency gcc13-libs>=13.4.0: found gcc13-libs-13.4.0
=> Full dependency perl>=5.44.0<5.45.0: found perl-5.44.0nb1
===> Overriding tools for bioperl-1.7.7nb7
===> Extracting for bioperl-1.7.7nb7
===> Patching for bioperl-1.7.7nb7
===> Creating toolchain wrappers for bioperl-1.7.7nb7
/usr/bin/sed  -e '/^#/d'  -e 's,@LINK_ARCH_DEFAULT@,link_arch64,g'  -e 's,@LINK_LIBGCC_DEFAULT@,link_libgcc_arch64,g'  -e 's,@LIBGCC_PREFIX@,/opt/local/gcc13/x86_64-sun-solaris2.11,g'  < ../../extra/gcc13-libs/files/specs.pkgsrc  > /tmp/work/biology/bioperl/work/.cwrapper/specs.pkgsrc
===> Configuring for bioperl-1.7.7nb7
=> Replacing Perl interpreter in examples/*.pl examples/*/*.pl.
Warning: prerequisite DB_File 0 not found.
Warning: prerequisite Module::Build 0 not found.
Warning: prerequisite Test::Memory::Cycle 0 not found.
Warning: prerequisite Test::RequiresInternet 0 not found.
Warning: prerequisite Test::Weaken 0 not found.
Warning: prerequisite XML::DOM::XPath 0 not found.
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for BioPerl
Writing MYMETA.yml and MYMETA.json