=> "/opt/local/bin/bmake" ["-C", "/data/jenkins/workspace/pkgsrc-trunk-x86_64/graphics/circos", "configure", "BATCH=1", "DEPENDS_TARGET=/nonexistent"]
WARNING: [license.mk] Every package should define a LICENSE.
=> Checksum BLAKE2s OK for circos-0.49.tgz
=> Checksum SHA512 OK for circos-0.49.tgz
===> Installing dependencies for circos-0.49nb11
=> Tool dependency pax>=20040802: found pax-20210219
=> Tool dependency perl>=5.0: found perl-5.44.0nb1
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Full dependency p5-Clone-[0-9]*: found p5-Clone-0.50nb1
=> Full dependency p5-Config-General-[0-9]*: found p5-Config-General-2.67nb2
=> Full dependency p5-GD-[0-9]*: found p5-GD-2.86nb2
=> Full dependency p5-Math-Bezier-[0-9]*: found p5-Math-Bezier-0.01nb20
=> Full dependency p5-Math-Round-[0-9]*: found p5-Math-Round-0.08nb3
=> Full dependency p5-Math-VecStat-[0-9]*: found p5-Math-VecStat-0.08nb17
=> Full dependency p5-Params-Validate-[0-9]*: found p5-Params-Validate-1.31nb4
=> Full dependency p5-Set-IntSpan>=1.11: found p5-Set-IntSpan-1.19nb13
===> Overriding tools for circos-0.49nb11
===> Extracting for circos-0.49nb11
cd /tmp/work/graphics/circos/work/circos-0.49 && rm -f bin/circos  && mv bin/circos-0.49 bin/circos
===> Patching for circos-0.49nb11
=> Applying pkgsrc patches for circos-0.49nb11
=> Verifying /data/jenkins/workspace/pkgsrc-trunk-x86_64/graphics/circos/patches/patch-aa
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-trunk-x86_64/graphics/circos/patches/patch-aa
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-aa,v 1.1.1.1 2009/04/21 17:51:05 schmonz Exp $
|
|--- bin/circos.orig	2009-01-30 18:31:20.000000000 -0500
|+++ bin/circos
--------------------------
Patching file bin/circos using Plan A...
Hunk #1 succeeded at 317.
done
===> Creating toolchain wrappers for circos-0.49nb11
===> Configuring for circos-0.49nb11
cd /tmp/work/graphics/circos/work/circos-0.49 && rm -f bin/*.orig
=> Replacing bash interpreter in data/6/gene.density.
INFO: [replace-interpreter] Nothing changed in data/6/gene.density.
=> Replacing Perl interpreter in data/3/make_random_highlights data/6/hist.random.make svg/textrotation.svg.
=> Substituting "paths" in */*/*/circos*.conf bin/circos
cd /tmp/work/graphics/circos/work/circos-0.49 && ( echo /opt/local/bin/perl ; echo ) | /bin/bash ./install


This script sets the location of the Perl binary in Circos scripts,
and sets the output directory for tutorial image files.

What is the full path to your perl binary? (/bin/env perl)
Setting Perl binary to /opt/local/bin/perl
What is the directory to which tutorial images should be written? (/tmp)
Setting output directory for tutorial files to /tmp

Done. You can run this script at any time to change these values.