[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include main.c -o main.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ main.c -o main.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include kthread.c -o kthread.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ kthread.c -o kthread.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include kalloc.c -o kalloc.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ kalloc.c -o kalloc.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include misc.c -o misc.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ misc.c -o misc.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include bseq.c -o bseq.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ bseq.c -o bseq.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include sketch.c -o sketch.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ sketch.c -o sketch.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include sdust.c -o sdust.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ sdust.c -o sdust.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include options.c -o options.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ options.c -o options.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include index.c -o index.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ index.c -o index.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include lchain.c -o lchain.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ lchain.c -o lchain.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include align.c -o align.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ align.c -o align.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include hit.c -o hit.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ hit.c -o hit.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include map.c -o map.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ map.c -o map.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include format.c -o format.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ format.c -o format.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include pe.c -o pe.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ pe.c -o pe.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include seed.c -o seed.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ seed.c -o seed.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include esterr.c -o esterr.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ esterr.c -o esterr.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -I/opt/local/include -I/usr/include splitidx.c -o splitidx.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ splitidx.c -o splitidx.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse4.1 -I/opt/local/include -I/usr/include ksw2_extz2_sse.c -o ksw2_extz2_simde.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse4.1 ksw2_extz2_sse.c -o ksw2_extz2_simde.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse4.1 -I/opt/local/include -I/usr/include ksw2_extd2_sse.c -o ksw2_extd2_simde.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse4.1 ksw2_extd2_sse.c -o ksw2_extd2_simde.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse4.1 -I/opt/local/include -I/usr/include ksw2_exts2_sse.c -o ksw2_exts2_simde.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse4.1 ksw2_exts2_sse.c -o ksw2_exts2_simde.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/local/include -I/usr/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse2 -I/opt/local/include -I/usr/include ksw2_ll_sse.c -o ksw2_ll_simde.o
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/tmp/work/biology/minimap2/work/.buildlink/include -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -msse2 ksw2_ll_sse.c -o ksw2_ll_simde.o -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf
[*] cc -L/opt/local/lib -Wl,-R/opt/local/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 main.o -o minimap2 -L. -lminimap2 -lm -lz -lpthread
<.> /tmp/work/biology/minimap2/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -L/tmp/work/biology/minimap2/work/.buildlink/lib -Wl,-rpath,/opt/local/lib main.o -o minimap2 -L. -lminimap2 -lm -lz -lpthread -specs=/tmp/work/biology/minimap2/work/.cwrapper/specs.pkgsrc -gdwarf-4 -gstrict-dwarf -I/tmp/work/biology/minimap2/work/.buildlink/include -lumem
[*] /tmp/work/biology/minimap2/work/.tools/bin/gzip -nf /tmp/work/biology/minimap2/work/.destdir/opt/local/man/man1/minimap2.1
<.> /usr/bin/gzip -nf -9 -nf /tmp/work/biology/minimap2/work/.destdir/opt/local/man/man1/minimap2.1