=> "/opt/local/bin/bmake" ["-C", "/data/jenkins/workspace/pkgsrc-trunk-x86_64/biology/plinkseq", "stage-install", "BATCH=1", "DEPENDS_TARGET=/nonexistent"]
===> Installing for plinkseq-0.08nb19
=> Generating pre-install file lists
Making install in lib
test -z "/opt/local/lib" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/lib"
 /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c -o pbuild -g pbuild  'libplinkseq.la' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.la'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild .libs/libplinkseq.so.0.0.0 /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.so.0.0.0
libtool: install: (cd /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib && { ln -s -f libplinkseq.so.0.0.0 libplinkseq.so.0 || { rm -f libplinkseq.so.0 && ln -s libplinkseq.so.0.0.0 libplinkseq.so.0; }; })
libtool: install: (cd /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib && { ln -s -f libplinkseq.so.0.0.0 libplinkseq.so || { rm -f libplinkseq.so && ln -s libplinkseq.so.0.0.0 libplinkseq.so; }; })
libtool: install: chmod +x /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.so.0.0.0
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild .libs/libplinkseq.lai /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.la
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild .libs/libplinkseq.a /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.a
libtool: install: chmod 644 /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.a
libtool: install: ranlib /tmp/work/biology/plinkseq/work/.destdir/opt/local/lib/libplinkseq.a
libtool: warning: remember to run 'libtool --finish /opt/local/lib'
Making install in client
test -z "/opt/local/bin" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin"
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'pseq' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/pseq'
libtool: warning: '../lib/libplinkseq.la' has not been installed in '/opt/local/lib'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 .libs/pseq /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/pseq
Making install in browser
test -z "/opt/local/bin" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin"
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'pbrowse.cgi' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/pbrowse.cgi'
libtool: warning: '../lib/libplinkseq.la' has not been installed in '/opt/local/lib'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 .libs/pbrowse.cgi /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/pbrowse.cgi
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'mongoose' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/mongoose'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 mongoose /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/mongoose
test -z "/opt/local/bin" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin"
 /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 'pbrowse' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/pbrowse'
Making install in util
test -z "/opt/local/bin" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin"
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'tab2vcf' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/tab2vcf'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 tab2vcf /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/tab2vcf
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'gcol' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/gcol'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 gcol /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/gcol
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'behead' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/behead'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 behead /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/behead
Making install in index
test -z "/opt/local/bin" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin"
  /usr/bin/bash ../libtool --mode=install /opt/local/bin/bsdinstall -c  -o pbuild -g pbuild -m 755 'index.cgi' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/index.cgi'
libtool: warning: '../lib/libplinkseq.la' has not been installed in '/opt/local/lib'
libtool: install: /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 .libs/index.cgi /tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/index.cgi
test -z "/opt/local/bin" || .././install-sh -c -d "/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin"
 /opt/local/bin/bsdinstall -c -o pbuild -g pbuild -m 755 'index' '/tmp/work/biology/plinkseq/work/.destdir/opt/local/bin/index'
=> Generating CTF data
=> Automatic stripping of debug information
=> Automatic manual page handling
=> Generating post-install file lists
=> Checking file-check results for plinkseq-0.08nb19
=> Checking for non-existent script interpreters in plinkseq-0.08nb19
=> Checking file permissions in plinkseq-0.08nb19
=> Checking for missing run-time search paths in plinkseq-0.08nb19
=> Checking for work-directory references in plinkseq-0.08nb19