+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /opt/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/pdbalign-20030812/work.log
+ su pbulk -c '"$@"' make /opt/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/pdbalign-20030812/work.log
WARNING: [license.mk] Every package should define a LICENSE.
=> Checksum BLAKE2s OK for pdbalign.tar.gz
=> Checksum SHA512 OK for pdbalign.tar.gz
===> Installing dependencies for pdbalign-20030812
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Tool dependency checkperms>=1.1: found checkperms-1.12
===> Overriding tools for pdbalign-20030812
===> Extracting for pdbalign-20030812
===> Patching for pdbalign-20030812
=> Applying pkgsrc patches for pdbalign-20030812
=> Verifying /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-aa
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-aa
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-aa,v 1.1.1.1 2003/09/26 03:15:28 jschauma Exp $
|
|--- Makefile.orig	Wed Aug 13 13:36:33 2003
|+++ Makefile
--------------------------
(Creating file Makefile...)
Patching file Makefile using Plan A...
Empty context always matches.
Hunk #1 succeeded at 1.
done
=> Verifying /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-ab
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-ab
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ab,v 1.1.1.1 2003/09/26 03:15:28 jschauma Exp $
|
|--- distalign.c.orig	Fri Jan 26 17:53:41 1996
|+++ distalign.c
--------------------------
Patching file distalign.c using Plan A...
Hunk #1 succeeded at 1019.
done
=> Verifying /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-ac
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-ac
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ac,v 1.1.1.1 2003/09/26 03:15:28 jschauma Exp $
|
|--- pdbalign.c.orig	Fri Jan 26 17:53:57 1996
|+++ pdbalign.c
--------------------------
Patching file pdbalign.c using Plan A...
Hunk #1 succeeded at 841.
done
=> Verifying /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-ad
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/pdbalign/patches/patch-ad
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ad,v 1.1.1.1 2003/09/26 03:15:28 jschauma Exp $
|
|--- pdbdist.c.orig	Fri Jan 26 17:54:11 1996
|+++ pdbdist.c
--------------------------
Patching file pdbdist.c using Plan A...
Hunk #1 succeeded at 628.
done
===> Creating toolchain wrappers for pdbalign-20030812
===> Configuring for pdbalign-20030812
=> Checking for portability problems in extracted files