+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/bwa-0.7.17nb7/work.log + su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/bwa-0.7.17nb7/work.log ===> Building for bwa-0.7.17nb7 gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS utils.c -o utils.o gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kthread.c -o kthread.o gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kstring.c -o kstring.o gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS ksw.c -o ksw.o kthread.c: In function 'kt_for': kthread.c:55:30: error: implicit declaration of function 'alloca' [-Wimplicit-function-declaration] 55 | t.w = (ktf_worker_t*)alloca(n_threads * sizeof(ktf_worker_t)); | ^~~~~~ kthread.c:55:30: warning: incompatible implicit declaration of built-in function 'alloca' [-Wbuiltin-declaration-mismatch] kthread.c: In function 'kt_pipeline': kthread.c:134:38: warning: incompatible implicit declaration of built-in function 'alloca' [-Wbuiltin-declaration-mismatch] 134 | aux.workers = (ktp_worker_t*)alloca(n_threads * sizeof(ktp_worker_t)); | ^~~~~~ gmake: *** [Makefile:28: kthread.o] Error 1 gmake: *** Waiting for unfinished jobs.... *** Error code 2 Stop. bmake[1]: stopped making "all" in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/bwa *** Error code 1 Stop. bmake: stopped making "all" in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/bwa