[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS utils.c -o utils.o
<.> /home/pbulk/build/biology/bwa/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/home/pbulk/build/biology/bwa/work/.buildlink/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS utils.c -o utils.o -gdwarf-2
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kthread.c -o kthread.o
<.> /home/pbulk/build/biology/bwa/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/home/pbulk/build/biology/bwa/work/.buildlink/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kthread.c -o kthread.o -gdwarf-2
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kstring.c -o kstring.o
<.> /home/pbulk/build/biology/bwa/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/home/pbulk/build/biology/bwa/work/.buildlink/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kstring.c -o kstring.o -gdwarf-2
[*] cc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/opt/pkg/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS ksw.c -o ksw.o
<.> /home/pbulk/build/biology/bwa/work/.gcc/bin/gcc -fcommon -std=gnu99 -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -Du_int32_t=uint32_t -I/home/pbulk/build/biology/bwa/work/.buildlink/include -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS ksw.c -o ksw.o -gdwarf-2