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-fPIC -DPIC conftest.c -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv -static conftest.c -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi -lnsl -lsocket -lsocket -lm -lpicl -lkstat -llgrp -lsocket -lnsl -lpthread -lnsl -lsocket -lsocket <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -lm -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv -static conftest.c -Wl,-rpath,/opt/pkg/lib -lmpi -lnsl -lsocket -lm -lpicl -lkstat -llgrp -lsocket -lnsl -lpthread -lnsl -lsocket -gdwarf-2 [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir conftest <.> /usr/bin/mkdir -p conftest [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir out <.> /usr/bin/mkdir -p out [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -o out/conftest2.o conftest.c -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -o out/conftest2.o conftest.c -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 conftest.c -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 conftest.c -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -shared -Wl,-h -Wl,conftest -o conftest conftest.o -v -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -shared -Wl,-h -Wl,conftest -o conftest conftest.o -v -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -print-search-dirs -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -print-search-dirs -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/strip -V <.> set args -V; shift; exit 0 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -ldld -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -ldld -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -DHAVE_DLFCN_H -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -DHAVE_DLFCN_H -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 conftest.cpp -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 conftest.cpp -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.cpp -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.cpp -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -print-prog-name=ld -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -print-prog-name=ld -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 --version -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib --version -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 conftest.cpp -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 conftest.cpp -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -shared -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -v conftest.o -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -shared -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -v conftest.o -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -fPIC -DPIC conftest.cpp -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -fPIC -DPIC conftest.cpp -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv -static conftest.cpp -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi -lnsl -lsocket -lsocket -lm -lpicl -lkstat -llgrp -lsocket -lnsl -lpthread -lnsl -lsocket -lsocket <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -lm -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv -static conftest.cpp -Wl,-rpath,/opt/pkg/lib -lmpi -lnsl -lsocket -lm -lpicl -lkstat -llgrp -lsocket -lnsl -lpthread -lnsl -lsocket -gdwarf-2 [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir conftest <.> /usr/bin/mkdir -p conftest [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir out <.> /usr/bin/mkdir -p out [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -o out/conftest2.o conftest.cpp -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -o out/conftest2.o conftest.cpp -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -print-search-dirs -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib 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[*] f77 -o conftest -O -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.f <.> /home/pbulk/build/biology/gromacs/work/.compiler/bin/fortran-fail-wrapper -m64 -fstack-protector-strong -o conftest -O -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -liconv conftest.f *** Please consider adding fortran to USE_LANGUAGES in the package Makefile. [*] f77 -c -O -fPIC conftest.f <.> /home/pbulk/build/biology/gromacs/work/.compiler/bin/fortran-fail-wrapper -m64 -fstack-protector-strong -c -O -fPIC conftest.f *** Please consider adding fortran to USE_LANGUAGES in the package Makefile. [*] f77 -o conftest -O -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv -static conftest.f <.> /home/pbulk/build/biology/gromacs/work/.compiler/bin/fortran-fail-wrapper -m64 -fstack-protector-strong -o conftest -O -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -liconv -static conftest.f *** Please consider adding fortran to USE_LANGUAGES in the package Makefile. [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir conftest <.> /usr/bin/mkdir -p conftest [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir out <.> /usr/bin/mkdir -p out [*] f77 -c -O -o out/conftest2.o conftest.f <.> /home/pbulk/build/biology/gromacs/work/.compiler/bin/fortran-fail-wrapper -m64 -fstack-protector-strong -c -O -o out/conftest2.o conftest.f *** Please consider adding fortran to USE_LANGUAGES in the package Makefile. [*] f77 -print-search-dirs <.> /home/pbulk/build/biology/gromacs/work/.compiler/bin/fortran-fail-wrapper -m64 -fstack-protector-strong -print-search-dirs *** Please consider adding fortran to USE_LANGUAGES in the package Makefile. [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 conftest.c -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 conftest.c -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -lfftw3 -lm -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 conftest.c -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 conftest.c -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -E 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -lnsl -lm -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -lnsl -lm -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args 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-fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -lnsl -lm -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -lm -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/usr/lib/amd64 -Wl,-R/usr/lib/amd64 -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -lnsl -lm -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> 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-I/opt/pkg/include -I/opt/pkg/include/libxml2 -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv conftest.c -lnsl -lm -I/opt/pkg/include -L/opt/pkg/lib -R/opt/pkg/lib -lmpi <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -lm -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -o conftest -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -Wl,-rpath,/opt/pkg/lib -liconv conftest.c -lnsl -lm -Wl,-rpath,/opt/pkg/lib -lmpi -gdwarf-2 [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir conftest.dir <.> /usr/bin/mkdir -p conftest.dir [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -E 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-fno-aggressive-loop-optimizations -MT nb_kernel410_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse2.Tpo -c nb_kernel410_x86_64_sse2.c -fPIC -DPIC -o .libs/nb_kernel410_x86_64_sse2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel410_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse2.Tpo -c nb_kernel410_x86_64_sse2.c -fPIC -DPIC -o .libs/nb_kernel410_x86_64_sse2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse2.Tpo -c nb_kernel_x86_64_sse2.c -fPIC -DPIC -o .libs/nb_kernel_x86_64_sse2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse2.Tpo 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'-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel400_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel400_x86_64_sse2.Tpo -c nb_kernel400_x86_64_sse2.c -o nb_kernel400_x86_64_sse2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse2.Tpo -c nb_kernel_x86_64_sse2.c -o nb_kernel_x86_64_sse2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel_x86_64_sse2.Tpo -c nb_kernel_x86_64_sse2.c -o nb_kernel_x86_64_sse2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel430_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel430_x86_64_sse2.Tpo -c nb_kernel430_x86_64_sse2.c -o nb_kernel430_x86_64_sse2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel430_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel430_x86_64_sse2.Tpo -c nb_kernel430_x86_64_sse2.c -o nb_kernel430_x86_64_sse2.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT nb_kernel_allvsall_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_double.Tpo -c -o nb_kernel_allvsall_sse2_double.lo nb_kernel_allvsall_sse2_double.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsall_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_double.Tpo -c -o nb_kernel_allvsall_sse2_double.lo nb_kernel_allvsall_sse2_double.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel410_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse2.Tpo -c nb_kernel410_x86_64_sse2.c -o nb_kernel410_x86_64_sse2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel410_x86_64_sse2.lo -MD -MP -MF .deps/nb_kernel410_x86_64_sse2.Tpo -c nb_kernel410_x86_64_sse2.c -o nb_kernel410_x86_64_sse2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsall_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_double.Tpo -c nb_kernel_allvsall_sse2_double.c -fPIC -DPIC -o .libs/nb_kernel_allvsall_sse2_double.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsall_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_double.Tpo -c nb_kernel_allvsall_sse2_double.c -fPIC -DPIC -o .libs/nb_kernel_allvsall_sse2_double.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT nb_kernel_allvsallgb_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_double.Tpo -c -o nb_kernel_allvsallgb_sse2_double.lo nb_kernel_allvsallgb_sse2_double.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsallgb_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_double.Tpo -c -o nb_kernel_allvsallgb_sse2_double.lo nb_kernel_allvsallgb_sse2_double.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsallgb_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_double.Tpo -c nb_kernel_allvsallgb_sse2_double.c -fPIC -DPIC -o .libs/nb_kernel_allvsallgb_sse2_double.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsallgb_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_double.Tpo -c nb_kernel_allvsallgb_sse2_double.c -fPIC -DPIC -o .libs/nb_kernel_allvsallgb_sse2_double.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsall_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_double.Tpo -c nb_kernel_allvsall_sse2_double.c -o nb_kernel_allvsall_sse2_double.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsall_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsall_sse2_double.Tpo -c nb_kernel_allvsall_sse2_double.c -o nb_kernel_allvsall_sse2_double.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel_allvsallgb_sse2_double.lo -MD -MP -MF .deps/nb_kernel_allvsallgb_sse2_double.Tpo -c nb_kernel_allvsallgb_sse2_double.c -o nb_kernel_allvsallgb_sse2_double.o -gdwarf-2 [*] libtool --tag=CC --mode=link mpicc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv -L/usr/ucblib -o libnb_kernel_x86_64_sse2.la nb_kernel010_x86_64_sse2.lo nb_kernel030_x86_64_sse2.lo nb_kernel100_x86_64_sse2.lo nb_kernel101_x86_64_sse2.lo nb_kernel102_x86_64_sse2.lo nb_kernel103_x86_64_sse2.lo nb_kernel104_x86_64_sse2.lo nb_kernel110_x86_64_sse2.lo nb_kernel111_x86_64_sse2.lo nb_kernel112_x86_64_sse2.lo nb_kernel113_x86_64_sse2.lo nb_kernel114_x86_64_sse2.lo nb_kernel130_x86_64_sse2.lo nb_kernel131_x86_64_sse2.lo nb_kernel132_x86_64_sse2.lo nb_kernel133_x86_64_sse2.lo 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'-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT nb_kernel010.lo -MD -MP -MF .deps/nb_kernel010.Tpo -c -o nb_kernel010.lo nb_kernel010.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel010.lo -MD -MP -MF .deps/nb_kernel010.Tpo -c -o nb_kernel010.lo nb_kernel010.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations 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-I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT nb_kernel124.lo -MD -MP -MF .deps/nb_kernel124.Tpo -c -o nb_kernel124.lo nb_kernel124.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel124.lo -MD -MP -MF .deps/nb_kernel124.Tpo -c -o nb_kernel124.lo nb_kernel124.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include 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'-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nb_kernel124.lo -MD -MP -MF .deps/nb_kernel124.Tpo -c nb_kernel124.c -fPIC -DPIC -o .libs/nb_kernel124.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT nb_kernel130.lo -MD -MP -MF .deps/nb_kernel130.Tpo -c -o nb_kernel130.lo nb_kernel130.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../../src -I/usr/include/libxml2 -I../../../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT daxpy.lo -MD -MP -MF .deps/daxpy.Tpo -c -o daxpy.lo daxpy.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsyr2.lo -MD -MP -MF .deps/dsyr2.Tpo -c dsyr2.c -o dsyr2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsyr2.lo -MD -MP -MF .deps/dsyr2.Tpo -c dsyr2.c -o dsyr2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dtrsm.lo -MD -MP -MF .deps/dtrsm.Tpo -c dtrsm.c -fPIC -DPIC -o .libs/dtrsm.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dtrsm.lo -MD -MP -MF .deps/dtrsm.Tpo -c dtrsm.c -fPIC -DPIC -o .libs/dtrsm.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT daxpy.lo -MD -MP -MF .deps/daxpy.Tpo -c daxpy.c -fPIC -DPIC -o .libs/daxpy.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT daxpy.lo -MD -MP -MF .deps/daxpy.Tpo -c daxpy.c -fPIC -DPIC -o .libs/daxpy.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT ddot.lo -MD -MP -MF .deps/ddot.Tpo -c -o ddot.lo ddot.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ddot.lo -MD -MP -MF .deps/ddot.Tpo -c -o ddot.lo ddot.c [*] cc 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dtrsm.lo -MD -MP -MF .deps/dtrsm.Tpo -c dtrsm.c -o dtrsm.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dtrsm.lo -MD -MP -MF .deps/dtrsm.Tpo -c dtrsm.c -o dtrsm.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include 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-fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgemv.lo -MD -MP -MF .deps/dgemv.Tpo -c dgemv.c -fPIC -DPIC -o .libs/dgemv.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dscal.lo -MD -MP -MF .deps/dscal.Tpo -c -o dscal.lo dscal.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dnrm2.lo -MD -MP -MF .deps/dnrm2.Tpo -c dnrm2.c -fPIC -DPIC -o .libs/dnrm2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgemv.lo -MD -MP -MF .deps/dgemv.Tpo -c dgemv.c -o dgemv.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgemv.lo -MD -MP -MF .deps/dgemv.Tpo -c dgemv.c -o dgemv.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dsymv.lo -MD -MP -MF .deps/dsymv.Tpo -c -o dsymv.lo dsymv.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsymv.lo -MD -MP -MF .deps/dsymv.Tpo -c -o dsymv.lo dsymv.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT idamax.lo -MD -MP -MF .deps/idamax.Tpo -c -o idamax.lo idamax.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsymv.lo -MD -MP -MF .deps/dsymv.Tpo -c dsymv.c -o dsymv.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsymv.lo -MD -MP -MF .deps/dsymv.Tpo -c dsymv.c -o dsymv.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT idamax.lo -MD -MP -MF .deps/idamax.Tpo -c idamax.c -fPIC -DPIC -o .libs/idamax.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT idamax.lo -MD -MP -MF .deps/idamax.Tpo -c idamax.c -fPIC -DPIC -o .libs/idamax.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsyr2k.lo -MD -MP -MF .deps/dsyr2k.Tpo -c dsyr2k.c -o dsyr2k.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsyr2k.lo -MD -MP -MF .deps/dsyr2k.Tpo -c dsyr2k.c -o dsyr2k.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT sasum.lo -MD -MP -MF .deps/sasum.Tpo -c -o sasum.lo sasum.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sasum.lo -MD -MP -MF .deps/sasum.Tpo -c -o sasum.lo sasum.c [*] cc 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dlasda.lo -MD -MP -MF .deps/dlasda.Tpo -c dlasda.c -o dlasda.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasda.lo -MD -MP -MF .deps/dlasda.Tpo -c dlasda.c -o dlasda.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dormqr.lo -MD -MP -MF .deps/dormqr.Tpo -c -o dormqr.lo dormqr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormqr.lo -MD -MP -MF .deps/dormqr.Tpo -c -o dormqr.lo dormqr.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dorgl2.lo -MD -MP -MF .deps/dorgl2.Tpo -c dorgl2.c -o dorgl2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dorgl2.lo -MD -MP -MF .deps/dorgl2.Tpo -c dorgl2.c -o dorgl2.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dbdsqr.lo -MD -MP -MF .deps/dbdsqr.Tpo -c -o dbdsqr.lo dbdsqr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dbdsqr.lo -MD -MP -MF .deps/dbdsqr.Tpo -c -o dbdsqr.lo dbdsqr.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dgetrf.lo -MD -MP -MF .deps/dgetrf.Tpo -c -o dgetrf.lo dgetrf.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrf.lo -MD -MP -MF .deps/dgetrf.Tpo -c -o dgetrf.lo dgetrf.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormqr.lo -MD -MP -MF .deps/dormqr.Tpo -c dormqr.c -fPIC -DPIC -o .libs/dormqr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormqr.lo -MD -MP -MF .deps/dormqr.Tpo -c dormqr.c -fPIC -DPIC -o .libs/dormqr.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlange.lo -MD -MP -MF .deps/dlange.Tpo -c -o dlange.lo dlange.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlange.lo -MD -MP -MF .deps/dlange.Tpo -c -o dlange.lo dlange.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrf.lo -MD -MP -MF .deps/dgetrf.Tpo -c dgetrf.c -fPIC -DPIC -o .libs/dgetrf.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrf.lo -MD -MP -MF .deps/dgetrf.Tpo -c dgetrf.c -fPIC -DPIC -o .libs/dgetrf.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dbdsqr.lo -MD -MP -MF .deps/dbdsqr.Tpo -c dbdsqr.c -fPIC -DPIC -o .libs/dbdsqr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dbdsqr.lo -MD -MP -MF .deps/dbdsqr.Tpo -c dbdsqr.c -fPIC -DPIC -o .libs/dbdsqr.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormqr.lo -MD -MP -MF .deps/dormqr.Tpo -c dormqr.c -o dormqr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormqr.lo -MD -MP -MF .deps/dormqr.Tpo -c dormqr.c -o dormqr.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlange.lo -MD -MP -MF .deps/dlange.Tpo -c dlange.c -fPIC -DPIC -o .libs/dlange.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlange.lo -MD -MP -MF .deps/dlange.Tpo -c dlange.c -fPIC -DPIC -o .libs/dlange.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlasd1.lo -MD -MP -MF .deps/dlasd1.Tpo -c -o dlasd1.lo dlasd1.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd1.lo -MD -MP -MF .deps/dlasd1.Tpo -c -o dlasd1.lo dlasd1.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrf.lo -MD -MP -MF .deps/dgetrf.Tpo -c dgetrf.c -o dgetrf.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrf.lo -MD -MP -MF .deps/dgetrf.Tpo -c dgetrf.c -o dgetrf.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dtrtri.lo -MD -MP -MF .deps/dtrtri.Tpo -c -o dtrtri.lo dtrtri.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dtrtri.lo -MD -MP -MF .deps/dtrtri.Tpo -c -o dtrtri.lo dtrtri.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd1.lo -MD -MP -MF .deps/dlasd1.Tpo -c dlasd1.c -fPIC -DPIC -o .libs/dlasd1.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd1.lo -MD -MP -MF .deps/dlasd1.Tpo -c dlasd1.c -fPIC -DPIC -o .libs/dlasd1.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlange.lo -MD -MP -MF .deps/dlange.Tpo -c dlange.c -o dlange.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlange.lo -MD -MP -MF .deps/dlange.Tpo -c dlange.c -o dlange.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlasdq.lo -MD -MP -MF .deps/dlasdq.Tpo -c -o dlasdq.lo dlasdq.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasdq.lo -MD -MP -MF .deps/dlasdq.Tpo -c -o dlasdq.lo dlasdq.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd2.lo -MD -MP -MF .deps/dlasd2.Tpo -c -o dlasd2.lo dlasd2.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlasdt.lo -MD -MP -MF .deps/dlasdt.Tpo -c -o dlasdt.lo dlasdt.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasdt.lo -MD -MP -MF .deps/dlasdt.Tpo -c -o dlasdt.lo dlasdt.c [*] cc -I/opt/pkg/include 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-fno-aggressive-loop-optimizations -MT dstebz.lo -MD -MP -MF .deps/dstebz.Tpo -c dstebz.c -fPIC -DPIC -o .libs/dstebz.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dsytrd.lo -MD -MP -MF .deps/dsytrd.Tpo -c -o dsytrd.lo dsytrd.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsytrd.lo -MD -MP -MF .deps/dsytrd.Tpo -c -o dsytrd.lo dsytrd.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include 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--tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlapy2.lo -MD -MP -MF .deps/dlapy2.Tpo -c -o dlapy2.lo dlapy2.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsytrd.lo -MD -MP -MF .deps/dsytrd.Tpo -c dsytrd.c -o dsytrd.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsytrd.lo -MD -MP -MF .deps/dsytrd.Tpo -c dsytrd.c -o dsytrd.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlacpy.lo -MD -MP -MF .deps/dlacpy.Tpo -c dlacpy.c -o dlacpy.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlacpy.lo -MD -MP -MF .deps/dlacpy.Tpo -c dlacpy.c -o dlacpy.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlasd3.lo -MD -MP -MF .deps/dlasd3.Tpo -c -o dlasd3.lo dlasd3.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe 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-I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlaset.lo -MD -MP -MF .deps/dlaset.Tpo -c dlaset.c -fPIC -DPIC -o .libs/dlaset.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlaset.lo -MD -MP -MF .deps/dlaset.Tpo -c dlaset.c -fPIC -DPIC -o .libs/dlaset.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlassq.lo -MD -MP -MF .deps/dlassq.Tpo -c -o dlassq.lo dlassq.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlassq.lo -MD -MP -MF .deps/dlassq.Tpo -c -o dlassq.lo dlassq.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrs.lo -MD -MP -MF .deps/dgetrs.Tpo -c -o dgetrs.lo dgetrs.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dorm2l.lo -MD -MP -MF .deps/dorm2l.Tpo -c dorm2l.c -fPIC -DPIC -o .libs/dorm2l.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dorm2l.lo -MD -MP -MF .deps/dorm2l.Tpo -c dorm2l.c -fPIC -DPIC -o .libs/dorm2l.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrs.lo -MD -MP -MF .deps/dgetrs.Tpo -c dgetrs.c -fPIC -DPIC -o .libs/dgetrs.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src 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-I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlassq.lo -MD -MP -MF .deps/dlassq.Tpo -c dlassq.c -o dlassq.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd3.lo -MD -MP -MF .deps/dlasd3.Tpo -c dlasd3.c -o dlasd3.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd3.lo -MD -MP -MF .deps/dlasd3.Tpo -c dlasd3.c -o dlasd3.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dorm2l.lo -MD -MP -MF .deps/dorm2l.Tpo -c dorm2l.c -o dorm2l.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dorm2l.lo -MD -MP -MF .deps/dorm2l.Tpo -c dorm2l.c -o dorm2l.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrs.lo -MD -MP -MF .deps/dgetrs.Tpo -c dgetrs.c -o dgetrs.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgetrs.lo -MD -MP -MF .deps/dgetrs.Tpo -c dgetrs.c -o dgetrs.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dstegr.lo -MD -MP -MF .deps/dstegr.Tpo -c -o dstegr.lo dstegr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dstegr.lo -MD -MP -MF .deps/dstegr.Tpo -c -o dstegr.lo dstegr.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dgelq2.lo -MD -MP -MF .deps/dgelq2.Tpo -c -o dgelq2.lo dgelq2.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgelq2.lo -MD -MP -MF .deps/dgelq2.Tpo -c -o dgelq2.lo dgelq2.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlae2.lo -MD -MP -MF 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarf.lo -MD -MP -MF .deps/dlarf.Tpo -c -o dlarf.lo dlarf.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgelqf.lo -MD -MP -MF .deps/dgelqf.Tpo -c dgelqf.c -o dgelqf.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgelqf.lo -MD -MP -MF .deps/dgelqf.Tpo -c dgelqf.c -o dgelqf.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlartg.lo -MD -MP -MF .deps/dlartg.Tpo -c -o dlartg.lo dlartg.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlartg.lo -MD -MP -MF .deps/dlartg.Tpo -c -o dlartg.lo dlartg.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src 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-I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasd5.lo -MD -MP -MF .deps/dlasd5.Tpo -c dlasd5.c -o dlasd5.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dormbr.lo -MD -MP -MF .deps/dormbr.Tpo -c -o dormbr.lo dormbr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormbr.lo -MD -MP -MF .deps/dormbr.Tpo -c -o dormbr.lo dormbr.c [*] cc 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.libs/dlasq2.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dsterf.lo -MD -MP -MF .deps/dsterf.Tpo -c -o dsterf.lo dsterf.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsterf.lo -MD -MP -MF .deps/dsterf.Tpo -c -o dsterf.lo dsterf.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlaswp.lo -MD -MP -MF .deps/dlaswp.Tpo -c dlaswp.c -fPIC -DPIC -o .libs/dlaswp.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlaswp.lo -MD -MP -MF .deps/dlaswp.Tpo -c dlaswp.c -fPIC -DPIC -o .libs/dlaswp.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarfg.lo -MD -MP -MF .deps/dlarfg.Tpo -c -o dlarfg.lo dlarfg.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlas2.lo -MD -MP -MF .deps/dlas2.Tpo -c -o dlas2.lo dlas2.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlas2.lo -MD -MP -MF .deps/dlas2.Tpo -c -o dlas2.lo dlas2.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args 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-I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dormlq.lo -MD -MP -MF .deps/dormlq.Tpo -c dormlq.c -o dormlq.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlagts.lo -MD -MP -MF .deps/dlagts.Tpo -c -o dlagts.lo dlagts.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlagts.lo -MD -MP -MF .deps/dlagts.Tpo -c -o dlagts.lo dlagts.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsytd2.lo -MD -MP -MF .deps/dsytd2.Tpo -c dsytd2.c -fPIC -DPIC -o .libs/dsytd2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsytd2.lo -MD -MP -MF .deps/dsytd2.Tpo -c dsytd2.c -fPIC -DPIC -o .libs/dsytd2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dgesdd.lo -MD -MP -MF .deps/dgesdd.Tpo -c dgesdd.c -fPIC -DPIC -o .libs/dgesdd.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlaev2.lo -MD -MP -MF .deps/dlaev2.Tpo -c dlaev2.c -fPIC -DPIC -o .libs/dlaev2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsteqr.lo -MD -MP -MF .deps/dsteqr.Tpo -c dsteqr.c -fPIC -DPIC -o .libs/dsteqr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsteqr.lo -MD -MP -MF .deps/dsteqr.Tpo -c dsteqr.c -fPIC -DPIC -o .libs/dsteqr.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlasrt2.lo -MD -MP -MF .deps/dlasrt2.Tpo -c -o dlasrt2.lo dlasrt2.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasrt2.lo -MD -MP -MF .deps/dlasrt2.Tpo -c -o dlasrt2.lo dlasrt2.c [*] cc 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-c dlasrt2.c -fPIC -DPIC -o .libs/dlasrt2.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlansy.lo -MD -MP -MF .deps/dlansy.Tpo -c -o dlansy.lo dlansy.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlansy.lo -MD -MP -MF .deps/dlansy.Tpo -c -o dlansy.lo dlansy.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasrt2.lo -MD -MP -MF .deps/dlasrt2.Tpo -c dlasrt2.c -o dlasrt2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlasrt2.lo -MD -MP -MF .deps/dlasrt2.Tpo -c dlasrt2.c -o dlasrt2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsyevr.lo -MD -MP -MF .deps/dsyevr.Tpo -c dsyevr.c -o dsyevr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsyevr.lo -MD -MP -MF .deps/dsyevr.Tpo -c dsyevr.c -o dsyevr.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlansy.lo -MD -MP -MF .deps/dlansy.Tpo -c dlansy.c -fPIC -DPIC -o .libs/dlansy.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlansy.lo -MD -MP -MF .deps/dlansy.Tpo -c dlansy.c -fPIC -DPIC -o .libs/dlansy.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 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dsteqr.c -o dsteqr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dsteqr.lo -MD -MP -MF .deps/dsteqr.Tpo -c dsteqr.c -o dsteqr.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlarrbx.lo -MD -MP -MF .deps/dlarrbx.Tpo -c -o dlarrbx.lo dlarrbx.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrbx.lo -MD -MP -MF .deps/dlarrbx.Tpo -c -o dlarrbx.lo dlarrbx.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlar1vx.lo -MD -MP -MF .deps/dlar1vx.Tpo -c dlar1vx.c -fPIC -DPIC -o .libs/dlar1vx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrbx.lo -MD -MP -MF .deps/dlarrbx.Tpo -c dlarrbx.c -fPIC -DPIC -o .libs/dlarrbx.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlarrex.lo -MD -MP -MF .deps/dlarrex.Tpo -c -o dlarrex.lo dlarrex.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrex.lo -MD -MP -MF .deps/dlarrex.Tpo -c -o dlarrex.lo dlarrex.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlarrfx.lo -MD -MP -MF .deps/dlarrfx.Tpo -c -o dlarrfx.lo dlarrfx.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrfx.lo -MD -MP -MF .deps/dlarrfx.Tpo -c -o dlarrfx.lo dlarrfx.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args 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-I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrfx.lo -MD -MP -MF .deps/dlarrfx.Tpo -c dlarrfx.c -fPIC -DPIC -o .libs/dlarrfx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrfx.lo -MD -MP -MF .deps/dlarrfx.Tpo -c dlarrfx.c -fPIC -DPIC -o .libs/dlarrfx.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT dlarrvx.lo -MD -MP -MF .deps/dlarrvx.Tpo -c -o dlarrvx.lo dlarrvx.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrvx.lo -MD -MP -MF .deps/dlarrvx.Tpo -c -o dlarrvx.lo dlarrvx.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrbx.lo -MD -MP -MF .deps/dlarrbx.Tpo -c dlarrbx.c -o dlarrbx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrbx.lo -MD -MP -MF .deps/dlarrbx.Tpo -c dlarrbx.c -o dlarrbx.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrfx.lo -MD -MP -MF .deps/dlarrfx.Tpo -c dlarrfx.c -o dlarrfx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrfx.lo -MD -MP -MF .deps/dlarrfx.Tpo -c dlarrfx.c -o dlarrfx.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrvx.lo -MD -MP -MF .deps/dlarrvx.Tpo -c dlarrvx.c -fPIC -DPIC -o .libs/dlarrvx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrvx.lo -MD -MP -MF .deps/dlarrvx.Tpo -c dlarrvx.c -fPIC -DPIC -o .libs/dlarrvx.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 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dlarrex.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrex.lo -MD -MP -MF .deps/dlarrex.Tpo -c dlarrex.c -o dlarrex.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sbdsdc.lo -MD -MP -MF .deps/sbdsdc.Tpo -c sbdsdc.c -fPIC -DPIC -o .libs/sbdsdc.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sbdsdc.lo -MD -MP -MF .deps/sbdsdc.Tpo -c sbdsdc.c -fPIC -DPIC -o .libs/sbdsdc.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT sgetf2.lo -MD -MP -MF .deps/sgetf2.Tpo -c -o sgetf2.lo sgetf2.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sgetf2.lo -MD -MP -MF .deps/sgetf2.Tpo -c -o sgetf2.lo sgetf2.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrvx.lo -MD -MP -MF .deps/dlarrvx.Tpo -c dlarrvx.c -o dlarrvx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT dlarrvx.lo -MD -MP -MF .deps/dlarrvx.Tpo -c dlarrvx.c -o dlarrvx.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sgetf2.lo -MD -MP -MF .deps/sgetf2.Tpo -c sgetf2.c -fPIC -DPIC -o .libs/sgetf2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sgetrf.lo -MD -MP -MF .deps/sgetrf.Tpo -c sgetrf.c -fPIC -DPIC -o .libs/sgetrf.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slange.lo -MD -MP -MF .deps/slange.Tpo -c -o slange.lo slange.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slange.lo -MD -MP -MF .deps/slange.Tpo -c -o slange.lo slange.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slasd1.lo -MD -MP -MF .deps/slasd1.Tpo -c -o slasd1.lo slasd1.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slasd1.lo -MD -MP -MF .deps/slasd1.Tpo -c -o slasd1.lo slasd1.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slange.lo -MD -MP -MF .deps/slange.Tpo -c slange.c -fPIC -DPIC -o .libs/slange.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slange.lo -MD -MP -MF .deps/slange.Tpo -c slange.c -fPIC -DPIC -o .libs/slange.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include 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-I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slasdq.lo -MD -MP -MF .deps/slasdq.Tpo -c -o slasdq.lo slasdq.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slasr.lo -MD -MP -MF .deps/slasr.Tpo -c -o slasr.lo slasr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slasr.lo -MD -MP -MF .deps/slasr.Tpo -c -o slasr.lo slasr.c [*] cc 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slanst.lo -MD -MP -MF .deps/slanst.Tpo -c slanst.c -o slanst.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slasrt.lo -MD -MP -MF .deps/slasrt.Tpo -c -o slasrt.lo slasrt.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe 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-fno-aggressive-loop-optimizations -MT slasdt.lo -MD -MP -MF .deps/slasdt.Tpo -c slasdt.c -o slasdt.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT sorgqr.lo -MD -MP -MF .deps/sorgqr.Tpo -c -o sorgqr.lo sorgqr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sorgqr.lo -MD -MP -MF .deps/sorgqr.Tpo -c -o sorgqr.lo sorgqr.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 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[*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sstebz.lo -MD -MP -MF .deps/sstebz.Tpo -c sstebz.c -o sstebz.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sstebz.lo -MD -MP -MF .deps/sstebz.Tpo -c sstebz.c -o sstebz.o -gdwarf-2 [*] cc 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slaset.lo -MD -MP -MF .deps/slaset.Tpo -c -o slaset.lo slaset.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slapy2.lo -MD -MP -MF .deps/slapy2.Tpo -c slapy2.c -fPIC -DPIC -o .libs/slapy2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slapy2.lo -MD -MP -MF .deps/slapy2.Tpo -c slapy2.c -fPIC -DPIC -o .libs/slapy2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slasd3.lo -MD -MP -MF .deps/slasd3.Tpo -c slasd3.c -fPIC -DPIC -o .libs/slasd3.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slasd3.lo -MD -MP -MF .deps/slasd3.Tpo -c slasd3.c -fPIC -DPIC -o .libs/slasd3.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slaset.lo -MD -MP -MF .deps/slaset.Tpo -c slaset.c -fPIC -DPIC -o .libs/slaset.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slaset.lo -MD -MP -MF .deps/slaset.Tpo -c slaset.c -fPIC -DPIC -o .libs/slaset.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slassq.lo -MD -MP -MF .deps/slassq.Tpo -c -o slassq.lo slassq.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slassq.lo -MD -MP -MF .deps/slassq.Tpo -c -o 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-gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slaset.lo -MD -MP -MF .deps/slaset.Tpo -c slaset.c -o slaset.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slaset.lo -MD -MP -MF .deps/slaset.Tpo -c slaset.c -o slaset.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT sorm2l.lo -MD -MP -MF .deps/sorm2l.Tpo -c -o sorm2l.lo sorm2l.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sorm2l.lo -MD -MP -MF .deps/sorm2l.Tpo -c -o sorm2l.lo sorm2l.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slassq.lo -MD -MP -MF .deps/slassq.Tpo -c slassq.c -fPIC -DPIC -o .libs/slassq.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slassq.lo -MD -MP -MF .deps/slassq.Tpo -c slassq.c -fPIC -DPIC -o .libs/slassq.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include 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-msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ssyevr.lo -MD -MP -MF .deps/ssyevr.Tpo -c ssyevr.c -o ssyevr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ssyevr.lo -MD -MP -MF .deps/ssyevr.Tpo -c ssyevr.c -o ssyevr.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 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--mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slar1vx.lo -MD -MP -MF .deps/slar1vx.Tpo -c -o slar1vx.lo slar1vx.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slar1vx.lo -MD -MP -MF .deps/slar1vx.Tpo -c -o slar1vx.lo slar1vx.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ssteqr.lo -MD -MP -MF .deps/ssteqr.Tpo -c ssteqr.c -o ssteqr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ssteqr.lo -MD -MP -MF .deps/ssteqr.Tpo -c ssteqr.c -o ssteqr.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slarrbx.lo -MD -MP -MF .deps/slarrbx.Tpo -c -o slarrbx.lo slarrbx.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrbx.lo -MD -MP -MF .deps/slarrbx.Tpo -c -o slarrbx.lo slarrbx.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slar1vx.lo -MD -MP -MF .deps/slar1vx.Tpo -c slar1vx.c -fPIC -DPIC -o .libs/slar1vx.o -I/opt/pkg/include <.> 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-I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slansy.lo -MD -MP -MF .deps/slansy.Tpo -c slansy.c -o slansy.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrbx.lo -MD -MP -MF .deps/slarrbx.Tpo -c slarrbx.c -fPIC -DPIC -o .libs/slarrbx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrbx.lo -MD -MP -MF .deps/slarrbx.Tpo -c slarrbx.c -fPIC -DPIC -o .libs/slarrbx.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slarrex.lo -MD -MP -MF .deps/slarrex.Tpo -c -o slarrex.lo slarrex.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrex.lo -MD -MP -MF .deps/slarrex.Tpo -c -o slarrex.lo slarrex.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT slarrfx.lo -MD -MP -MF .deps/slarrfx.Tpo -c -o slarrfx.lo slarrfx.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrfx.lo -MD -MP -MF .deps/slarrfx.Tpo -c -o slarrfx.lo slarrfx.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slar1vx.lo -MD -MP -MF .deps/slar1vx.Tpo -c slar1vx.c -o slar1vx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slar1vx.lo -MD -MP -MF .deps/slar1vx.Tpo -c 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-DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrfx.lo -MD -MP -MF .deps/slarrfx.Tpo -c slarrfx.c -o slarrfx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrfx.lo -MD -MP -MF .deps/slarrfx.Tpo -c slarrfx.c -o slarrfx.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT ilasrt2.lo -MD -MP -MF .deps/ilasrt2.Tpo -c -o ilasrt2.lo ilasrt2.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ilasrt2.lo -MD -MP -MF .deps/ilasrt2.Tpo -c -o ilasrt2.lo ilasrt2.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrvx.lo -MD -MP -MF .deps/slarrvx.Tpo -c slarrvx.c -fPIC -DPIC -o .libs/slarrvx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrvx.lo -MD -MP -MF .deps/slarrvx.Tpo -c slarrvx.c -fPIC -DPIC -o .libs/slarrvx.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ilasrt2.lo -MD -MP -MF .deps/ilasrt2.Tpo -c ilasrt2.c -fPIC -DPIC -o .libs/ilasrt2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ilasrt2.lo -MD -MP -MF .deps/ilasrt2.Tpo -c ilasrt2.c -fPIC -DPIC -o .libs/ilasrt2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrex.lo -MD -MP -MF .deps/slarrex.Tpo -c slarrex.c -o slarrex.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrex.lo -MD -MP -MF .deps/slarrex.Tpo -c slarrex.c -o slarrex.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ilasrt2.lo -MD -MP -MF .deps/ilasrt2.Tpo -c ilasrt2.c -o ilasrt2.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ilasrt2.lo -MD -MP -MF .deps/ilasrt2.Tpo -c ilasrt2.c -o ilasrt2.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrvx.lo -MD -MP -MF .deps/slarrvx.Tpo -c slarrvx.c -o slarrvx.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../../src -I/usr/include/libxml2 -I../../../include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT slarrvx.lo -MD -MP -MF .deps/slarrvx.Tpo -c slarrvx.c -o slarrvx.o -gdwarf-2 [*] libtool --tag=CC --mode=link mpicc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv -L/usr/ucblib -o liblapack.la dbdsdc.lo dgetf2.lo dlamrg.lo dlarnv.lo dlasd0.lo dlasda.lo dlasq6.lo dorgl2.lo dormqr.lo dbdsqr.lo dgetrf.lo dlange.lo dlasd1.lo dtrtri.lo dlasdq.lo dlasr.lo dorglq.lo dormtr.lo dgebd2.lo dlabrd.lo dlanst.lo dlasd2.lo dlasdt.lo dlasrt.lo dorgqr.lo dstebz.lo dgebrd.lo dsytrd.lo dlacpy.lo dlapy2.lo dlasd3.lo dlaset.lo dlassq.lo dorm2l.lo dgetrs.lo dstegr.lo dgelq2.lo dlae2.lo dlasd4.lo dlasq1.lo dtrti2.lo dgetri.lo dlasv2.lo dorm2r.lo dstein.lo dgelqf.lo dlaebz.lo dlarf.lo dlartg.lo dlasd5.lo dlasq2.lo dlaswp.lo dormbr.lo dsterf.lo dgeqr2.lo dlaed6.lo dlarfb.lo dlaruv.lo dlasd6.lo dlasq3.lo dlatrd.lo dorml2.lo dstevr.lo dgeqrf.lo dlagtf.lo dlarfg.lo dlas2.lo dlasd7.lo dlasq4.lo dorg2r.lo dormlq.lo dsytd2.lo dgesdd.lo dlagts.lo dlarft.lo dlascl.lo dlasd8.lo dlasq5.lo dorgbr.lo dormql.lo dlaev2.lo dsteqr.lo dsyevr.lo dlasrt2.lo dlansy.lo dlar1vx.lo dlarrbx.lo dlarrex.lo dlarrfx.lo dlarrvx.lo sbdsdc.lo sgetf2.lo slamrg.lo slarnv.lo slasd0.lo slasda.lo slasq6.lo sorgl2.lo sormqr.lo sbdsqr.lo sgetrf.lo slange.lo slasd1.lo ssytrd.lo slasdq.lo slasr.lo sorglq.lo sormtr.lo sgebd2.lo slabrd.lo slanst.lo slasd2.lo slasdt.lo slasrt.lo sorgqr.lo sstebz.lo sgebrd.lo sgetrs.lo slacpy.lo slapy2.lo slasd3.lo slaset.lo slassq.lo sorm2l.lo sgetri.lo sstegr.lo sgelq2.lo slae2.lo slasd4.lo slasq1.lo strti2.lo strtri.lo slasv2.lo sorm2r.lo sstein.lo sgelqf.lo slaebz.lo slarf.lo slartg.lo slasd5.lo slasq2.lo slaswp.lo sormbr.lo ssterf.lo sgeqr2.lo slaed6.lo slarfb.lo slaruv.lo slasd6.lo slasq3.lo slatrd.lo sorml2.lo sstevr.lo sgeqrf.lo slagtf.lo slarfg.lo slas2.lo slasd7.lo slasq4.lo sorg2r.lo sormlq.lo ssytd2.lo sgesdd.lo slagts.lo slarft.lo slascl.lo slasd8.lo slasq5.lo sorgbr.lo sormql.lo slaev2.lo ssteqr.lo ssyevr.lo slasrt2.lo slansy.lo slar1vx.lo slarrbx.lo slarrex.lo slarrfx.lo slarrvx.lo ilasrt2.lo -lnsl -lm <.> /opt/pkg/bin/libtool --tag=CC --mode=link mpicc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -liconv -o liblapack.la dbdsdc.lo dgetf2.lo dlamrg.lo dlarnv.lo dlasd0.lo dlasda.lo dlasq6.lo dorgl2.lo dormqr.lo dbdsqr.lo dgetrf.lo dlange.lo dlasd1.lo dtrtri.lo dlasdq.lo dlasr.lo dorglq.lo dormtr.lo dgebd2.lo dlabrd.lo dlanst.lo dlasd2.lo dlasdt.lo dlasrt.lo dorgqr.lo dstebz.lo dgebrd.lo dsytrd.lo dlacpy.lo dlapy2.lo dlasd3.lo dlaset.lo dlassq.lo dorm2l.lo dgetrs.lo dstegr.lo dgelq2.lo dlae2.lo dlasd4.lo dlasq1.lo dtrti2.lo dgetri.lo dlasv2.lo dorm2r.lo dstein.lo dgelqf.lo dlaebz.lo dlarf.lo dlartg.lo dlasd5.lo dlasq2.lo dlaswp.lo dormbr.lo dsterf.lo dgeqr2.lo dlaed6.lo dlarfb.lo dlaruv.lo dlasd6.lo dlasq3.lo dlatrd.lo dorml2.lo dstevr.lo dgeqrf.lo dlagtf.lo dlarfg.lo dlas2.lo dlasd7.lo dlasq4.lo dorg2r.lo dormlq.lo dsytd2.lo dgesdd.lo dlagts.lo dlarft.lo dlascl.lo dlasd8.lo dlasq5.lo dorgbr.lo dormql.lo dlaev2.lo dsteqr.lo dsyevr.lo dlasrt2.lo dlansy.lo dlar1vx.lo dlarrbx.lo dlarrex.lo dlarrfx.lo dlarrvx.lo sbdsdc.lo sgetf2.lo slamrg.lo slarnv.lo slasd0.lo slasda.lo slasq6.lo sorgl2.lo sormqr.lo sbdsqr.lo sgetrf.lo slange.lo slasd1.lo ssytrd.lo slasdq.lo slasr.lo sorglq.lo sormtr.lo sgebd2.lo slabrd.lo slanst.lo slasd2.lo slasdt.lo slasrt.lo sorgqr.lo sstebz.lo sgebrd.lo sgetrs.lo slacpy.lo slapy2.lo slasd3.lo slaset.lo slassq.lo sorm2l.lo sgetri.lo sstegr.lo sgelq2.lo slae2.lo slasd4.lo slasq1.lo strti2.lo strtri.lo slasv2.lo sorm2r.lo sstein.lo sgelqf.lo slaebz.lo slarf.lo slartg.lo slasd5.lo slasq2.lo slaswp.lo sormbr.lo ssterf.lo sgeqr2.lo slaed6.lo slarfb.lo slaruv.lo slasd6.lo slasq3.lo slatrd.lo sorml2.lo sstevr.lo sgeqrf.lo slagtf.lo slarfg.lo slas2.lo slasd7.lo slasq4.lo sorg2r.lo sormlq.lo ssytd2.lo sgesdd.lo slagts.lo slarft.lo slascl.lo slasd8.lo slasq5.lo sorgbr.lo sormql.lo slaev2.lo ssteqr.lo ssyevr.lo slasrt2.lo slansy.lo slar1vx.lo slarrbx.lo slarrex.lo slarrfx.lo slarrvx.lo ilasrt2.lo -lnsl -lm [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c -o atomprop.lo atomprop.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c -o atomprop.lo atomprop.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c -o bondfree.lo bondfree.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c -o bondfree.lo bondfree.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c -o 3dview.lo 3dview.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c -o 3dview.lo 3dview.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c -o calcgrid.lo calcgrid.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c -o calcgrid.lo calcgrid.c [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs <.> /usr/bin/mkdir -p .libs [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs <.> /usr/bin/mkdir -p .libs [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs <.> /usr/bin/mkdir -p .libs [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs <.> /usr/bin/mkdir -p .libs [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c bondfree.c -fPIC -DPIC -o .libs/bondfree.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c bondfree.c -fPIC -DPIC -o .libs/bondfree.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c 3dview.c -fPIC -DPIC -o .libs/3dview.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c 3dview.c -fPIC -DPIC -o .libs/3dview.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c atomprop.c -fPIC -DPIC -o .libs/atomprop.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c atomprop.c -fPIC -DPIC -o .libs/atomprop.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c calcgrid.c -fPIC -DPIC -o .libs/calcgrid.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT calcgrid.lo -MD -MP -MF .deps/calcgrid.Tpo -c calcgrid.c -o calcgrid.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c atomprop.c -o atomprop.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT atomprop.lo -MD -MP -MF .deps/atomprop.Tpo -c atomprop.c -o atomprop.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT 3dview.lo -MD -MP -MF .deps/3dview.Tpo -c 3dview.c -o 3dview.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args 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'-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT chargegroup.lo -MD -MP -MF .deps/chargegroup.Tpo -c chargegroup.c -o chargegroup.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT confio.lo -MD -MP -MF .deps/confio.Tpo -c -o confio.lo confio.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT confio.lo -MD -MP -MF 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT copyrite.lo -MD -MP -MF .deps/copyrite.Tpo -c copyrite.c -o copyrite.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c bondfree.c -o bondfree.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT bondfree.lo -MD -MP -MF .deps/bondfree.Tpo -c bondfree.c -o bondfree.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT disre.lo -MD -MP -MF .deps/disre.Tpo -c -o disre.lo disre.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT 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-I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT ewald_util.lo -MD -MP -MF .deps/ewald_util.Tpo -c -o ewald_util.lo ewald_util.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ewald_util.lo -MD -MP -MF .deps/ewald_util.Tpo -c -o ewald_util.lo ewald_util.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mshift.lo -MD -MP -MF .deps/mshift.Tpo -c -o mshift.lo mshift.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT maths.lo -MD -MP -MF .deps/maths.Tpo -c maths.c -o maths.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT maths.lo -MD -MP -MF .deps/maths.Tpo -c maths.c -o maths.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT mtop_util.lo -MD -MP -MF .deps/mtop_util.Tpo -c -o mtop_util.lo mtop_util.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtop_util.lo -MD -MP -MF .deps/mtop_util.Tpo -c -o mtop_util.lo mtop_util.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mshift.lo -MD -MP -MF .deps/mshift.Tpo -c mshift.c -fPIC -DPIC -o .libs/mshift.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mshift.lo -MD -MP -MF .deps/mshift.Tpo -c mshift.c -fPIC -DPIC -o .libs/mshift.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT mtxio.lo -MD -MP -MF .deps/mtxio.Tpo -c -o mtxio.lo mtxio.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtxio.lo -MD -MP -MF .deps/mtxio.Tpo -c -o mtxio.lo mtxio.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtop_util.lo -MD -MP -MF .deps/mtop_util.Tpo -c mtop_util.c -fPIC -DPIC -o .libs/mtop_util.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtxio.lo -MD -MP -MF .deps/mtxio.Tpo -c mtxio.c -fPIC -DPIC -o .libs/mtxio.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT matio.lo -MD -MP -MF .deps/matio.Tpo -c matio.c -o matio.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT matio.lo -MD -MP -MF .deps/matio.Tpo -c matio.c -o matio.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtxio.lo -MD -MP -MF .deps/mtxio.Tpo -c mtxio.c -o mtxio.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtxio.lo -MD -MP -MF .deps/mtxio.Tpo -c mtxio.c -o mtxio.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT mvdata.lo -MD -MP -MF .deps/mvdata.Tpo -c -o mvdata.lo mvdata.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mshift.lo -MD -MP -MF .deps/mshift.Tpo -c mshift.c -o mshift.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtop_util.lo -MD -MP -MF .deps/mtop_util.Tpo -c mtop_util.c -o mtop_util.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mtop_util.lo -MD -MP -MF .deps/mtop_util.Tpo -c mtop_util.c -o mtop_util.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mvdata.lo -MD -MP -MF .deps/mvdata.Tpo -c mvdata.c -fPIC -DPIC -o .libs/mvdata.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT names.lo -MD -MP -MF .deps/names.Tpo -c -o names.lo names.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT network.lo -MD -MP -MF .deps/network.Tpo -c -o network.lo network.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT network.lo -MD -MP -MF .deps/network.Tpo -c -o network.lo network.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT nrama.lo -MD -MP -MF .deps/nrama.Tpo -c -o nrama.lo nrama.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nrama.lo -MD -MP -MF .deps/nrama.Tpo -c -o nrama.lo nrama.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' 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-I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT names.lo -MD -MP -MF .deps/names.Tpo -c names.c -fPIC -DPIC -o .libs/names.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT names.lo -MD -MP -MF .deps/names.Tpo -c names.c -fPIC -DPIC -o .libs/names.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations 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'-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT statutil.lo -MD -MP -MF .deps/statutil.Tpo -c statutil.c -fPIC -DPIC -o .libs/statutil.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sortwater.lo -MD -MP -MF .deps/sortwater.Tpo -c sortwater.c -o sortwater.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT tpxio.lo -MD -MP -MF .deps/tpxio.Tpo -c -o tpxio.lo tpxio.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT tpxio.lo -MD -MP -MF .deps/tpxio.Tpo -c tpxio.c -fPIC -DPIC -o .libs/tpxio.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT tpxio.lo -MD -MP -MF .deps/tpxio.Tpo -c tpxio.c -fPIC -DPIC -o .libs/tpxio.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT trnio.lo -MD -MP -MF .deps/trnio.Tpo -c -o trnio.lo trnio.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT trnio.lo -MD -MP -MF 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-D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT vmdio.lo -MD -MP -MF .deps/vmdio.Tpo -c vmdio.c -o vmdio.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT vmddlopen.lo -MD -MP -MF .deps/vmddlopen.Tpo -c vmddlopen.c -fPIC -DPIC -o .libs/vmddlopen.o -I/opt/pkg/include <.> 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vmddlopen.lo -MD -MP -MF .deps/vmddlopen.Tpo -c vmddlopen.c -o vmddlopen.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT vmddlopen.lo -MD -MP -MF .deps/vmddlopen.Tpo -c vmddlopen.c -o vmddlopen.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c -o sighandler.lo sighandler.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c -o sighandler.lo sighandler.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c -o oenv.lo oenv.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c -o oenv.lo oenv.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c -o gmxfio_rw.lo gmxfio_rw.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c -o gmxfio_rw.lo gmxfio_rw.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmx_arpack.lo -MD -MP -MF .deps/gmx_arpack.Tpo -c gmx_arpack.c -o gmx_arpack.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmx_arpack.lo -MD -MP -MF .deps/gmx_arpack.Tpo -c gmx_arpack.c -o gmx_arpack.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c sighandler.c -fPIC -DPIC -o .libs/sighandler.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c sighandler.c -fPIC -DPIC -o .libs/sighandler.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c oenv.c -fPIC -DPIC -o .libs/oenv.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c oenv.c -fPIC -DPIC -o .libs/oenv.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c gmxfio_rw.c -fPIC -DPIC -o .libs/gmxfio_rw.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c gmxfio_rw.c -fPIC -DPIC -o .libs/gmxfio_rw.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c sighandler.c -o sighandler.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT sighandler.lo -MD -MP -MF .deps/sighandler.Tpo -c sighandler.c -o sighandler.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c -o gmxfio_asc.lo gmxfio_asc.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c -o gmxfio_asc.lo gmxfio_asc.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c oenv.c -o oenv.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT oenv.lo -MD -MP -MF .deps/oenv.Tpo -c oenv.c -o oenv.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c gmxfio_asc.c -fPIC -DPIC -o .libs/gmxfio_asc.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c gmxfio_asc.c -fPIC -DPIC -o .libs/gmxfio_asc.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c -o gmxfio_bin.lo gmxfio_bin.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c -o gmxfio_bin.lo gmxfio_bin.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c gmxfio_rw.c -o gmxfio_rw.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_rw.lo -MD -MP -MF .deps/gmxfio_rw.Tpo -c gmxfio_rw.c -o gmxfio_rw.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_asc.lo -MD -MP -MF .deps/gmxfio_asc.Tpo -c gmxfio_asc.c -o gmxfio_asc.o -I/opt/pkg/include <.> 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-MF .deps/gmxfio_bin.Tpo -c gmxfio_bin.c -fPIC -DPIC -o .libs/gmxfio_bin.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c gmxfio_bin.c -fPIC -DPIC -o .libs/gmxfio_bin.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c gmxfio_bin.c -o gmxfio_bin.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_bin.lo -MD -MP -MF .deps/gmxfio_bin.Tpo -c gmxfio_bin.c -o gmxfio_bin.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c -o gmxfio_xdr.lo gmxfio_xdr.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c -o gmxfio_xdr.lo gmxfio_xdr.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c gmxfio_xdr.c -fPIC -DPIC -o .libs/gmxfio_xdr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c gmxfio_xdr.c -fPIC -DPIC -o .libs/gmxfio_xdr.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c gmxfio_xdr.c -o gmxfio_xdr.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT gmxfio_xdr.lo -MD -MP -MF .deps/gmxfio_xdr.Tpo -c gmxfio_xdr.c -o gmxfio_xdr.o -gdwarf-2 [*] libtool --tag=CC --mode=link mpicc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -no-undefined -version-info 6:0:0 -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -liconv -L/usr/ucblib -o libgmx_mpi_d.la -rpath /opt/pkg/lib 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo chargegroup.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmx_fatal.lo gmx_sort.lo gmxcpp.lo gmxfio.lo ifunc.lo index.lo inputrec.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo sfactor.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo warninp.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo gmx_matrix.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo gmx_system_xdr.lo md5.lo vmdio.lo vmddlopen.lo sighandler.lo oenv.lo gmxfio_rw.lo gmxfio_asc.lo gmxfio_bin.lo gmxfio_xdr.lo nonbonded/libnonbonded.la selection/libselection.la statistics/libstatistics.la trajana/libtrajana.la gmx_blas/libblas.la gmx_lapack/liblapack.la -lnsl -lm <.> /opt/pkg/bin/libtool --tag=CC --mode=link mpicc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -no-undefined -version-info 6:0:0 -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -liconv -o libgmx_mpi_d.la -rpath /opt/pkg/lib 3dview.lo atomprop.lo bondfree.lo calcgrid.lo calch.lo chargegroup.lo checkpoint.lo confio.lo copyrite.lo disre.lo do_fit.lo enxio.lo ewald_util.lo ffscanf.lo filenm.lo futil.lo gbutil.lo gmx_fatal.lo gmx_sort.lo gmxcpp.lo gmxfio.lo ifunc.lo index.lo inputrec.lo cinvsqrtdata.lo invblock.lo macros.lo orires.lo sparsematrix.lo main.lo maths.lo matio.lo mshift.lo mtop_util.lo mtxio.lo mvdata.lo names.lo network.lo nrama.lo nrjac.lo nrnb.lo pargs.lo pbc.lo pdbio.lo princ.lo rando.lo random.lo gmx_random.lo rbin.lo readinp.lo replace.lo rmpbc.lo shift_util.lo sortwater.lo smalloc.lo statutil.lo sfactor.lo strdb.lo string2.lo symtab.lo topsort.lo tpxio.lo trnio.lo trxio.lo txtdump.lo typedefs.lo viewit.lo warninp.lo wgms.lo wman.lo writeps.lo xdrd.lo xtcio.lo xvgr.lo libxdrf.lo gmx_arpack.lo gmx_matrix.lo dihres.lo tcontrol.lo splitter.lo gmx_cyclecounter.lo gmx_system_xdr.lo md5.lo vmdio.lo vmddlopen.lo sighandler.lo oenv.lo gmxfio_rw.lo gmxfio_asc.lo gmxfio_bin.lo gmxfio_xdr.lo nonbonded/libnonbonded.la selection/libselection.la statistics/libstatistics.la trajana/libtrajana.la gmx_blas/libblas.la gmx_lapack/liblapack.la -lnsl -lm [*] cc -shared -fPIC -DPIC -Wl,-z -Wl,text -Wl,-h -Wl,libgmx_mpi_d.so.6 -o .libs/libgmx_mpi_d.so.6.0.0 .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/chargegroup.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmx_fatal.o .libs/gmx_sort.o .libs/gmxcpp.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/inputrec.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/sfactor.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/warninp.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/gmx_matrix.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o .libs/gmx_system_xdr.o .libs/md5.o .libs/vmdio.o .libs/vmddlopen.o .libs/sighandler.o .libs/oenv.o .libs/gmxfio_rw.o .libs/gmxfio_asc.o .libs/gmxfio_bin.o .libs/gmxfio_xdr.o -Wl,-z -Wl,allextract nonbonded/.libs/libnonbonded.a selection/.libs/libselection.a statistics/.libs/libstatistics.a trajana/.libs/libtrajana.a gmx_blas/.libs/libblas.a gmx_lapack/.libs/liblapack.a -Wl,-z -Wl,defaultextract -R/home/pbulk/build/biology/gromacs/work/.buildlink/lib -R/home/pbulk/build/biology/gromacs/work/.buildlink/lib -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib /home/pbulk/build/biology/gromacs/work/.buildlink/lib/libiconv.so -lnsl -lm -O2 -msave-args -Wl,-rpath -Wl,/opt/pkg/lib <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -shared -fPIC -DPIC -Wl,-z -Wl,text -Wl,-h -Wl,libgmx_mpi_d.so.6 -o .libs/libgmx_mpi_d.so.6.0.0 .libs/3dview.o .libs/atomprop.o .libs/bondfree.o .libs/calcgrid.o .libs/calch.o .libs/chargegroup.o .libs/checkpoint.o .libs/confio.o .libs/copyrite.o .libs/disre.o .libs/do_fit.o .libs/enxio.o .libs/ewald_util.o .libs/ffscanf.o .libs/filenm.o .libs/futil.o .libs/gbutil.o .libs/gmx_fatal.o .libs/gmx_sort.o .libs/gmxcpp.o .libs/gmxfio.o .libs/ifunc.o .libs/index.o .libs/inputrec.o .libs/cinvsqrtdata.o .libs/invblock.o .libs/macros.o .libs/orires.o .libs/sparsematrix.o .libs/main.o .libs/maths.o .libs/matio.o .libs/mshift.o .libs/mtop_util.o .libs/mtxio.o .libs/mvdata.o .libs/names.o .libs/network.o .libs/nrama.o .libs/nrjac.o .libs/nrnb.o .libs/pargs.o .libs/pbc.o .libs/pdbio.o .libs/princ.o .libs/rando.o .libs/random.o .libs/gmx_random.o .libs/rbin.o .libs/readinp.o .libs/replace.o .libs/rmpbc.o .libs/shift_util.o .libs/sortwater.o .libs/smalloc.o .libs/statutil.o .libs/sfactor.o .libs/strdb.o .libs/string2.o .libs/symtab.o .libs/topsort.o .libs/tpxio.o .libs/trnio.o .libs/trxio.o .libs/txtdump.o .libs/typedefs.o .libs/viewit.o .libs/warninp.o .libs/wgms.o .libs/wman.o .libs/writeps.o .libs/xdrd.o .libs/xtcio.o .libs/xvgr.o .libs/libxdrf.o .libs/gmx_arpack.o .libs/gmx_matrix.o .libs/dihres.o .libs/tcontrol.o .libs/splitter.o .libs/gmx_cyclecounter.o .libs/gmx_system_xdr.o .libs/md5.o .libs/vmdio.o .libs/vmddlopen.o .libs/sighandler.o .libs/oenv.o .libs/gmxfio_rw.o .libs/gmxfio_asc.o .libs/gmxfio_bin.o .libs/gmxfio_xdr.o -Wl,-z -Wl,allextract nonbonded/.libs/libnonbonded.a selection/.libs/libselection.a statistics/.libs/libstatistics.a trajana/.libs/libtrajana.a gmx_blas/.libs/libblas.a gmx_lapack/.libs/liblapack.a -Wl,-z -Wl,defaultextract -Wl,-rpath,/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -L/home/pbulk/build/biology/gromacs/work/.buildlink/lib -liconv -lnsl -lm -O2 -msave-args -Wl,-rpath,/opt/pkg/lib -gdwarf-2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs/libgmx_mpi_d.lax <.> /usr/bin/mkdir -p .libs/libgmx_mpi_d.lax [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs/libgmx_mpi_d.lax/libnonbonded.a <.> /usr/bin/mkdir -p .libs/libgmx_mpi_d.lax/libnonbonded.a [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs/libgmx_mpi_d.lax/libselection.a <.> /usr/bin/mkdir -p .libs/libgmx_mpi_d.lax/libselection.a [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs/libgmx_mpi_d.lax/libstatistics.a <.> /usr/bin/mkdir -p .libs/libgmx_mpi_d.lax/libstatistics.a [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs/libgmx_mpi_d.lax/libtrajana.a <.> /usr/bin/mkdir -p .libs/libgmx_mpi_d.lax/libtrajana.a [*] /home/pbulk/build/biology/gromacs/work/.tools/bin/mkdir .libs/libgmx_mpi_d.lax/libblas.a <.> /usr/bin/mkdir -p .libs/libgmx_mpi_d.lax/libblas.a [*] 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mdatom.lo -MD -MP -MF .deps/mdatom.Tpo -c mdatom.c -o mdatom.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT minimize.lo -MD -MP -MF .deps/minimize.Tpo -c -o minimize.lo minimize.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT minimize.lo -MD -MP -MF .deps/minimize.Tpo -c -o minimize.lo minimize.c [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT mvxvf.lo -MD -MP -MF .deps/mvxvf.Tpo -c -o mvxvf.lo mvxvf.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mvxvf.lo -MD -MP -MF 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'-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mvxvf.lo -MD -MP -MF .deps/mvxvf.Tpo -c mvxvf.c -fPIC -DPIC -o .libs/mvxvf.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT mdebin.lo -MD -MP -MF .deps/mdebin.Tpo -c mdebin.c -o mdebin.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations 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-I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nlistheuristics.lo -MD -MP -MF .deps/nlistheuristics.Tpo -c nlistheuristics.c -o nlistheuristics.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT minimize.lo -MD -MP -MF .deps/minimize.Tpo -c minimize.c -o minimize.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nsgrid.lo -MD -MP -MF .deps/nsgrid.Tpo -c -o nsgrid.lo nsgrid.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nsgrid.lo -MD -MP -MF .deps/nsgrid.Tpo -c nsgrid.c -fPIC -DPIC -o .libs/nsgrid.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nsgrid.lo -MD -MP -MF .deps/nsgrid.Tpo -c nsgrid.c -fPIC -DPIC -o .libs/nsgrid.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nsgrid.lo -MD -MP -MF .deps/nsgrid.Tpo -c nsgrid.c -o nsgrid.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT nsgrid.lo -MD -MP -MF .deps/nsgrid.Tpo -c nsgrid.c -o nsgrid.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT perf_est.lo -MD -MP -MF .deps/perf_est.Tpo -c -o perf_est.lo perf_est.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT perf_est.lo -MD -MP -MF .deps/perf_est.Tpo -c -o perf_est.lo perf_est.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT perf_est.lo -MD -MP -MF .deps/perf_est.Tpo -c perf_est.c -fPIC -DPIC -o .libs/perf_est.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT perf_est.lo -MD -MP -MF .deps/perf_est.Tpo -c perf_est.c -fPIC -DPIC -o .libs/perf_est.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT genborn.lo -MD -MP -MF .deps/genborn.Tpo -c -o genborn.lo genborn.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args 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-I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT ns.lo -MD -MP -MF .deps/ns.Tpo -c ns.c -o ns.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn.lo -MD -MP -MF .deps/genborn.Tpo -c genborn.c -fPIC -DPIC -o .libs/genborn.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn.lo -MD -MP -MF .deps/genborn.Tpo -c genborn.c -fPIC -DPIC -o .libs/genborn.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT genborn_sse2_single.lo -MD -MP -MF .deps/genborn_sse2_single.Tpo -c -o genborn_sse2_single.lo genborn_sse2_single.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn_sse2_single.lo -MD -MP -MF .deps/genborn_sse2_single.Tpo -c -o genborn_sse2_single.lo genborn_sse2_single.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT perf_est.lo -MD -MP -MF .deps/perf_est.Tpo -c perf_est.c -o perf_est.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT perf_est.lo -MD -MP -MF .deps/perf_est.Tpo -c perf_est.c -o perf_est.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn_sse2_single.lo -MD -MP -MF .deps/genborn_sse2_single.Tpo -c genborn_sse2_single.c -fPIC -DPIC -o .libs/genborn_sse2_single.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong 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-DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn_sse2_double.lo -MD -MP -MF .deps/genborn_sse2_double.Tpo -c -o genborn_sse2_double.lo genborn_sse2_double.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn_sse2_double.lo -MD -MP -MF .deps/genborn_sse2_double.Tpo -c genborn_sse2_double.c -fPIC -DPIC -o .libs/genborn_sse2_double.o -I/opt/pkg/include <.> 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-fno-aggressive-loop-optimizations -MT pme.lo -MD -MP -MF .deps/pme.Tpo -c pme.c -fPIC -DPIC -o .libs/pme.o -gdwarf-2 [*] libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/opt/pkg/include -I/opt/pkg/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/opt/pkg/include/libxml2 -MT pme_pp.lo -MD -MP -MF .deps/pme_pp.Tpo -c -o pme_pp.lo pme_pp.c <.> /opt/pkg/bin/libtool --tag=CC --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT pme_pp.lo -MD -MP -MF .deps/pme_pp.Tpo -c -o pme_pp.lo pme_pp.c [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT groupcoord.lo -MD -MP -MF .deps/groupcoord.Tpo -c groupcoord.c -o groupcoord.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT groupcoord.lo -MD -MP -MF .deps/groupcoord.Tpo -c groupcoord.c -o groupcoord.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT pme_pp.lo -MD -MP -MF .deps/pme_pp.Tpo -c pme_pp.c -fPIC -DPIC -o .libs/pme_pp.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT pme_pp.lo -MD -MP -MF .deps/pme_pp.Tpo -c pme_pp.c -fPIC -DPIC -o .libs/pme_pp.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT pme_pp.lo -MD -MP -MF .deps/pme_pp.Tpo -c pme_pp.c -o pme_pp.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT pme_pp.lo -MD -MP -MF .deps/pme_pp.Tpo -c pme_pp.c -o pme_pp.o -gdwarf-2 [*] cc -I/opt/pkg/include -I/usr/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -I/usr/include -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn_allvsall_sse2_double.lo -MD -MP -MF .deps/genborn_allvsall_sse2_double.Tpo -c genborn_allvsall_sse2_double.c -o genborn_allvsall_sse2_double.o -I/opt/pkg/include <.> /home/pbulk/build/biology/gromacs/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -I/home/pbulk/build/biology/gromacs/work/.buildlink/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -DHAVE_CONFIG_H -I. -I../../src -I/usr/include/libxml2 -I../../include '-DGMXLIBDIR="/opt/pkg/share/top"' -I/home/pbulk/build/biology/gromacs/work/.buildlink/include/libxml2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -MT genborn_allvsall_sse2_double.lo -MD -MP -MF .deps/genborn_allvsall_sse2_double.Tpo -c genborn_allvsall_sse2_double.c -o genborn_allvsall_sse2_double.o -gdwarf-2