[*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include CMakeCCompilerId.c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include CMakeCCompilerId.c -gdwarf-2 [*] cc -print-sysroot <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -gdwarf-2 -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include CMakeCXXCompilerId.cpp <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include CMakeCXXCompilerId.cpp [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -E -x c++-header /opt/pkg/share/cmake-3.31/Modules/CXX-DetectStdlib.h -o - <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -E -x c++-header /opt/pkg/share/cmake-3.31/Modules/CXX-DetectStdlib.h -o - [*] c++ -print-sysroot <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -v -o CMakeFiles/cmTC_bc8dd.dir/CMakeCCompilerABI.c.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCCompilerABI.c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_bc8dd.dir/CMakeCCompilerABI.c.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCCompilerABI.c -gdwarf-2 [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -v CMakeFiles/cmTC_bc8dd.dir/CMakeCCompilerABI.c.o -o cmTC_bc8dd <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -v CMakeFiles/cmTC_bc8dd.dir/CMakeCCompilerABI.c.o -o cmTC_bc8dd -gdwarf-2 [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -v -o CMakeFiles/cmTC_85860.dir/CMakeCXXCompilerABI.cpp.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCXXCompilerABI.cpp <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_85860.dir/CMakeCXXCompilerABI.cpp.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCXXCompilerABI.cpp [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -v CMakeFiles/cmTC_85860.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_85860 <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -v CMakeFiles/cmTC_85860.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_85860 [*] c++ -DCOMPILER_SUPPORTS_CXX17 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -std=c++17 -o CMakeFiles/cmTC_2e93e.dir/src.cxx.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-fEqISC/src.cxx <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DCOMPILER_SUPPORTS_CXX17 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -std=c++17 -o CMakeFiles/cmTC_2e93e.dir/src.cxx.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-fEqISC/src.cxx [*] c++ -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -L/opt/pkg/lib -Wl,-R/opt/pkg/lib CMakeFiles/cmTC_2e93e.dir/src.cxx.o -o cmTC_2e93e <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib CMakeFiles/cmTC_2e93e.dir/src.cxx.o -o cmTC_2e93e [*] cc -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -o CMakeFiles/cmTC_88a6c.dir/src.c.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-gEqISC/src.c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_88a6c.dir/src.c.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/CMakeFiles/CMakeScratch/TryCompile-gEqISC/src.c -gdwarf-2 [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -L/opt/pkg/lib -Wl,-R/opt/pkg/lib CMakeFiles/cmTC_88a6c.dir/src.c.o -o cmTC_88a6c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib CMakeFiles/cmTC_88a6c.dir/src.c.o -o cmTC_88a6c -gdwarf-2 [*] /home/pbulk/build/biology/kallisto/work/.tools/bin/mkdir -p build <.> /usr/bin/mkdir -p -p build [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include CMakeCCompilerId.c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include CMakeCCompilerId.c -gdwarf-2 [*] cc -print-sysroot <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -gdwarf-2 -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] c++ -Wno-subobject-linkage -Wno-return-type CMakeCXXCompilerId.cpp <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type CMakeCXXCompilerId.cpp -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] c++ -Wno-subobject-linkage -Wno-return-type -E -x c++-header /opt/pkg/share/cmake-3.31/Modules/CXX-DetectStdlib.h -o - <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type -E -x c++-header /opt/pkg/share/cmake-3.31/Modules/CXX-DetectStdlib.h -o - -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] c++ -print-sysroot <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -print-sysroot -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -v -o CMakeFiles/cmTC_a181c.dir/CMakeCCompilerABI.c.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCCompilerABI.c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_a181c.dir/CMakeCCompilerABI.c.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCCompilerABI.c -gdwarf-2 [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -v CMakeFiles/cmTC_a181c.dir/CMakeCCompilerABI.c.o -o cmTC_a181c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -v CMakeFiles/cmTC_a181c.dir/CMakeCCompilerABI.c.o -o cmTC_a181c -gdwarf-2 [*] c++ -Wno-subobject-linkage -Wno-return-type -v -o CMakeFiles/cmTC_5c12e.dir/CMakeCXXCompilerABI.cpp.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCXXCompilerABI.cpp <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type -v -o CMakeFiles/cmTC_5c12e.dir/CMakeCXXCompilerABI.cpp.o -c /opt/pkg/share/cmake-3.31/Modules/CMakeCXXCompilerABI.cpp -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] c++ -Wno-subobject-linkage -Wno-return-type -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -v CMakeFiles/cmTC_5c12e.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_5c12e <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wno-subobject-linkage -Wno-return-type -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib -v CMakeFiles/cmTC_5c12e.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_5c12e -I/home/pbulk/build/biology/kallisto/work/.buildlink/include [*] cc -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -o CMakeFiles/cmTC_5da09.dir/src.c.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/build/CMakeFiles/CMakeScratch/TryCompile-DeqTeD/src.c <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DCMAKE_HAVE_LIBC_PTHREAD -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_5da09.dir/src.c.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/build/CMakeFiles/CMakeScratch/TryCompile-DeqTeD/src.c -gdwarf-2 [*] cc -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -L/opt/pkg/lib -Wl,-R/opt/pkg/lib CMakeFiles/cmTC_5da09.dir/src.c.o -o cmTC_5da09 <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/gcc -fcommon -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -L/home/pbulk/build/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/opt/pkg/lib CMakeFiles/cmTC_5da09.dir/src.c.o -o cmTC_5da09 -gdwarf-2 [*] c++ -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src -I/opt/pkg/include -Wno-subobject-linkage -Wno-return-type -std=c++11 -O3 -DNDEBUG -O3 -MD -MT src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -MF CMakeFiles/bifrost_static.dir/Bifrost.cpp.o.d -o CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src/Bifrost.cpp <.> /home/pbulk/build/biology/kallisto/work/.gcc/bin/g++ -m64 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src -I/home/pbulk/build/biology/kallisto/work/.buildlink/include -Wno-subobject-linkage -Wno-return-type -std=c++11 -O3 -DNDEBUG -O3 -MD -MT src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -MF CMakeFiles/bifrost_static.dir/Bifrost.cpp.o.d -o CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -c /home/pbulk/build/biology/kallisto/work/kallisto-0.51.1/ext/bifrost/src/Bifrost.cpp