+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent PYTHON_VERSION_REQD=314 WRKLOG=/tmp/bulklog/py314-bcbio-gff-0.7.1/work.log + su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent PYTHON_VERSION_REQD=314 WRKLOG=/tmp/bulklog/py314-bcbio-gff-0.7.1/work.log WARNING: lang/python/egg.mk is deprecated; use lang/python/wheel.mk instead. ===> Building for py314-bcbio-gff-0.7.1 (cd /home/pbulk/build/biology/py-bcbio-gff/work/bcbio-gff-0.7.1/ && /usr/bin/env USETOOLS=no PTHREAD_CFLAGS=\ -pthread\ PTHREAD_LDFLAGS=\ -pthread PTHREAD_LIBS=-lpthread\ -lrt PTHREADBASE=/usr DL_CFLAGS= DL_LDFLAGS= DL_LIBS= PYTHON=/opt/pkg/bin/python3.14 CC=gcc CFLAGS=-pipe\ -O2\ -msave-args\ -fno-aggressive-loop-optimizations\ -I/usr/include\ -I/opt/pkg/include/python3.14\ -I/opt/pkg/include CPPFLAGS=-I/usr/include\ -I/opt/pkg/include/python3.14\ -I/opt/pkg/include CXX=g++ CXXFLAGS=-pipe\ -O2\ -msave-args\ -fno-aggressive-loop-optimizations\ -I/usr/include\ -I/opt/pkg/include/python3.14\ -I/opt/pkg/include COMPILER_RPATH_FLAG=-Wl,-R F77=gfortran FC=gfortran FFLAGS=-O LANG=C LC_ALL=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/usr/lib/amd64\ -Wl,-R/usr/lib/amd64\ -Wl,-R/opt/pkg/lib\ -lintl\ -liconv\ -L/opt/pkg/lib LINKER_RPATH_FLAG=-R PATH=/home/pbulk/build/biology/py-bcbio-gff/work/.cwrapper/bin:/home/pbulk/build/biology/py-bcbio-gff/work/.buildlink/bin:/home/pbulk/build/biology/py-bcbio-gff/work/.gcc/bin:/home/pbulk/build/biology/py-bcbio-gff/work/.tools/bin:/opt/pkg/bin:/sbin:/usr/sbin:/usr/bin:/opt/tools/bin:/opt/pkg/bin:/opt/pkg/bin PREFIX=/opt/pkg MAKELEVEL=0 CONFIG_SITE= ftp_proxy=downloads-forbidden-except-during-fetch http_proxy=downloads-forbidden-except-during-fetch https_proxy=downloads-forbidden-except-during-fetch no_proxy= PKG_SYSCONFDIR=/etc/opt/pkg CXXCPP=cpp HOME=/home/pbulk/build/biology/py-bcbio-gff/work/.home CWRAPPERS_CONFIG_DIR=/home/pbulk/build/biology/py-bcbio-gff/work/.cwrapper/config CPP=cpp LOCALBASE=/opt/pkg X11BASE=/opt/pkg PKGMANDIR=share/man PKGINFODIR=info PKGGNUDIR=gnu/ MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/opt/pkg/bin/bsdinstall\ -c\ \ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_SCRIPT=/opt/pkg/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_LIB=/opt/pkg/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_DATA=/opt/pkg/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 644 BSD_INSTALL_MAN=/opt/pkg/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 644 BSD_INSTALL=/opt/pkg/bin/bsdinstall BSD_INSTALL_PROGRAM_DIR=/opt/pkg/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/opt/pkg/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_LIB_DIR=/opt/pkg/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_DATA_DIR=/opt/pkg/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_MAN_DIR=/opt/pkg/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_GAME=/opt/pkg/bin/bsdinstall\ -c\ \ -o\ pbulk\ -g\ pbulk\ -m\ 2555 BSD_INSTALL_GAME_DATA=/opt/pkg/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 664 BSD_INSTALL_GAME_DIR=/opt/pkg/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 775 INSTALL_INFO= MAKEINFO=/home/pbulk/build/biology/py-bcbio-gff/work/.tools/bin/makeinfo FLEX= BISON= ITSTOOL=/home/pbulk/build/biology/py-bcbio-gff/work/.tools/bin/itstool GDBUS_CODEGEN=/home/pbulk/build/biology/py-bcbio-gff/work/.tools/bin/gdbus-codegen PKG_CONFIG=/home/pbulk/build/biology/py-bcbio-gff/work/.tools/bin/pkg-config PKG_CONFIG_LIBDIR=/home/pbulk/build/biology/py-bcbio-gff/work/.buildlink/lib/amd64/pkgconfig:/home/pbulk/build/biology/py-bcbio-gff/work/.buildlink/lib/pkgconfig:/home/pbulk/build/biology/py-bcbio-gff/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/home/pbulk/build/biology/py-bcbio-gff/work/.pkg-config.log PKG_CONFIG_PATH= CWRAPPERS_CONFIG_DIR=/home/pbulk/build/biology/py-bcbio-gff/work/.cwrapper/config /opt/pkg/bin/python3.14 setup.py build -j4) Downloading http://pypi.python.org/packages/source/d/distribute/distribute-0.6.49.tar.gz Traceback (most recent call last): File "/home/pbulk/build/biology/py-bcbio-gff/work/bcbio-gff-0.7.1/distribute_setup.py", line 146, in use_setuptools import pkg_resources ModuleNotFoundError: No module named 'pkg_resources' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/pkg/lib/python3.14/urllib/request.py", line 1321, in do_open h.request(req.get_method(), req.selector, req.data, headers, ~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ encode_chunked=req.has_header('Transfer-encoding')) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/http/client.py", line 1358, in request self._send_request(method, url, body, headers, encode_chunked) ~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/http/client.py", line 1404, in _send_request self.endheaders(body, encode_chunked=encode_chunked) ~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/http/client.py", line 1353, in endheaders self._send_output(message_body, encode_chunked=encode_chunked) ~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/http/client.py", line 1113, in _send_output self.send(msg) ~~~~~~~~~^^^^^ File "/opt/pkg/lib/python3.14/http/client.py", line 1057, in send self.connect() ~~~~~~~~~~~~^^ File "/opt/pkg/lib/python3.14/http/client.py", line 1023, in connect self.sock = self._create_connection( ~~~~~~~~~~~~~~~~~~~~~~~^ (self.host,self.port), self.timeout, self.source_address) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/socket.py", line 846, in create_connection for res in getaddrinfo(host, port, 0, SOCK_STREAM): ~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/socket.py", line 983, in getaddrinfo for res in _socket.getaddrinfo(host, port, family, type, proto, flags): ~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ socket.gaierror: [Errno 8] node name or service name not known During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/pbulk/build/biology/py-bcbio-gff/work/bcbio-gff-0.7.1/setup.py", line 5, in use_setuptools() ~~~~~~~~~~~~~~^^ File "/home/pbulk/build/biology/py-bcbio-gff/work/bcbio-gff-0.7.1/distribute_setup.py", line 162, in use_setuptools return _do_download(version, download_base, to_dir, download_delay) File "/home/pbulk/build/biology/py-bcbio-gff/work/bcbio-gff-0.7.1/distribute_setup.py", line 130, in _do_download tarball = download_setuptools(version, download_base, to_dir, download_delay) File "/home/pbulk/build/biology/py-bcbio-gff/work/bcbio-gff-0.7.1/distribute_setup.py", line 211, in download_setuptools src = urlopen(url) File "/opt/pkg/lib/python3.14/urllib/request.py", line 187, in urlopen return opener.open(url, data, timeout) ~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/urllib/request.py", line 487, in open response = self._open(req, data) File "/opt/pkg/lib/python3.14/urllib/request.py", line 504, in _open result = self._call_chain(self.handle_open, protocol, protocol + '_open', req) File "/opt/pkg/lib/python3.14/urllib/request.py", line 464, in _call_chain result = func(*args) File "/opt/pkg/lib/python3.14/urllib/request.py", line 1350, in http_open return self.do_open(http.client.HTTPConnection, req) ~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/pkg/lib/python3.14/urllib/request.py", line 1324, in do_open raise URLError(err) urllib.error.URLError: *** Error code 1 Stop. bmake[1]: stopped making "all" in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/py-bcbio-gff *** Error code 1 Stop. bmake: stopped making "all" in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/py-bcbio-gff